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Sample GSM303985 Query DataSets for GSM303985
Status Public on Nov 21, 2008
Title SLE-7 #2 @36wks, asymptomatic on treatment with sirolimus (-2101365652)
Sample type RNA
 
Source name SLE-7 #2 @36wks
Organism Mus musculus
Characteristics Disease_status:asymptomatic on treatment with sirolimus
Gender:Female
Quality__3'/5'_Mean:1.25
Quality__Absent_(%):56.1
Quality__Absent_(%)_Dev.:0.53
Quality__Background_Mean_Dev.:1.11
Quality__Classification:Good
Quality__Defective_Area_(%):0.05
Quality__Distortion_Severity:0.03
Quality__Gradient_Severity:0.02
Quality__Outlier_Area_(%):0.04
Quality__Scaling_Factor:0.26
Quality__Scaling_Factor_Dev.:0.86
RNA_source_key:-2101365652
Strain:NZB/W F1
Timepoint:36wks
Tissue:Kidney
Treatment:Rapamycin
Extracted molecule polyA RNA
Extraction protocol RNA was extracted from mouse kidney
Label biotin
Label protocol Affymetrix in-vitro labeling protocol
 
Hybridization protocol Affymetrix standard hybridization protocol
Scan protocol Affymetrix standard scan protocol
Description Cohort ID = 3:2000023008
Data processing Affymetrix MAS 5.0 algorithm
 
Submission date Jul 07, 2008
Last update date Nov 21, 2008
Contact name Padmalatha Reddy
E-mail(s) [email protected]
Organization name WYETH
Street address 35 Cambridgepark Drive
City Cambridge
State/province MA
ZIP/Postal code 02140
Country USA
 
Platform ID GPL75
Series (1)
GSE12024 Effect of Sirolimus treatment on lupus nephritis in NZB/W F1 female mice

Data table header descriptions
ID_REF Affymetrix Probeset
VALUE MAS 5.0 Signal value
DETECTION P-VALUE MAS 5.0 Detection p-value

Data table
ID_REF VALUE DETECTION P-VALUE
AA000151_at 48.33012 0.095667
AA004127_at 14.131417 0.470241
AA009039_at 71.878639 0.131361
AA014405_at 11.025848 0.737173
AA014745_at 32.457798 0.001593
AA014816_s_at 9.913474 0.39692
AA016480_at 2.530883 0.712257
AA016517_s_at 40.746155 0.340661
AA016609_at 19.110315 0.039661
AA023300_at 74.644943 0.001593
AA023445_at 105.803375 0.227636
AA023577_at 15.318748 0.834139
AA024154_s_at 54.243736 0.102165
AA027411_s_at 68.765091 0.083592
AA027702_at 132.460266 0.062929
AA028265_s_at 3.558612 0.973889
AA028280_at 8.245567 0.544587
AA028426_at 14.627945 0.737173
AA028728_s_at 7.351568 0.976071
AA030220_at 42.52187 0.116113

Total number of rows: 6584

Table truncated, full table size 203 Kbytes.




Supplementary file Size Download File type/resource
GSM303985.cel.gz 2.1 Mb (ftp)(http) CEL
Processed data included within Sample table

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