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Sample GSM303980 Query DataSets for GSM303980
Status Public on Nov 21, 2008
Title SLE-7 #3 @36wks, diseased/symptomatic (-2102085829)
Sample type RNA
 
Source name SLE-7 #3 @36wks
Organism Mus musculus
Characteristics Disease_status:diseased/symptomatic
Gender:Female
Quality__3'/5'_Mean:1.99
Quality__Absent_(%):52.4
Quality__Absent_(%)_Dev.:0.15
Quality__Background_Mean_Dev.:0.67
Quality__Classification:Good
Quality__Defective_Area_(%):0
Quality__Distortion_Severity:0.02
Quality__Gradient_Severity:0.01
Quality__Outlier_Area_(%):0.09
Quality__Scaling_Factor:0.17
Quality__Scaling_Factor_Dev.:0.53
RNA_source_key:-2102085829
Strain:NZB/W F1
Timepoint:36wks
Tissue:Kidney
Treatment:Untreated
Extracted molecule polyA RNA
Extraction protocol RNA was extracted from mouse kidney
Label biotin
Label protocol Affymetrix in-vitro labeling protocol
 
Hybridization protocol Affymetrix standard hybridization protocol
Scan protocol Affymetrix standard scan protocol
Description Cohort ID = 2:2000023006
Data processing Affymetrix MAS 5.0 algorithm
 
Submission date Jul 07, 2008
Last update date Nov 21, 2008
Contact name Padmalatha Reddy
E-mail(s) [email protected]
Organization name WYETH
Street address 35 Cambridgepark Drive
City Cambridge
State/province MA
ZIP/Postal code 02140
Country USA
 
Platform ID GPL75
Series (1)
GSE12024 Effect of Sirolimus treatment on lupus nephritis in NZB/W F1 female mice

Data table header descriptions
ID_REF Affymetrix Probeset
VALUE MAS 5.0 Signal value
DETECTION P-VALUE MAS 5.0 Detection p-value

Data table
ID_REF VALUE DETECTION P-VALUE
AA000151_at 53.093266 0.021902
AA004127_at 15.903913 0.41138
AA009039_at 61.789753 0.165861
AA014405_at 6.805694 0.686277
AA014745_at 30.554056 0.001102
AA014816_s_at 10.52843 0.239063
AA016480_at 18.044195 0.340661
AA016517_s_at 37.614956 0.239063
AA016609_at 17.74852 0.139482
AA023300_at 65.98735 0.004484
AA023445_at 95.400093 0.327079
AA023577_at 7.998676 0.843268
AA024154_s_at 46.715408 0.123572
AA027411_s_at 53.685177 0.147939
AA027702_at 94.099358 0.123572
AA028265_s_at 5.590663 0.910522
AA028280_at 16.920458 0.327079
AA028426_at 13.855369 0.659339
AA028728_s_at 7.138005 0.981719
AA030220_at 36.239021 0.156732

Total number of rows: 6584

Table truncated, full table size 203 Kbytes.




Supplementary file Size Download File type/resource
GSM303980.cel.gz 2.2 Mb (ftp)(http) CEL
Processed data included within Sample table

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