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Sample GSM303979 Query DataSets for GSM303979
Status Public on Nov 21, 2008
Title SLE-7 #3 @36wks, asymptomatic on treatment with sirolimus (-2101365196)
Sample type RNA
 
Source name SLE-7 #3 @36wks
Organism Mus musculus
Characteristics Disease_status:asymptomatic on treatment with sirolimus
Gender:Female
Quality__3'/5'_Mean:1.09
Quality__Absent_(%):60.48
Quality__Absent_(%)_Dev.:1.32
Quality__Background_Mean_Dev.:0.58
Quality__Classification:Medium
Quality__Defective_Area_(%):0
Quality__Distortion_Severity:0.07
Quality__Gradient_Severity:0.02
Quality__Outlier_Area_(%):0.02
Quality__Scaling_Factor:0.28
Quality__Scaling_Factor_Dev.:1.2
RNA_source_key:-2101365196
Strain:NZB/W F1
Timepoint:36wks
Tissue:Kidney
Treatment:Rapamycin
Extracted molecule polyA RNA
Extraction protocol RNA was extracted from mouse kidney
Label biotin
Label protocol Affymetrix in-vitro labeling protocol
 
Hybridization protocol Affymetrix standard hybridization protocol
Scan protocol Affymetrix standard scan protocol
Description Cohort ID = 3:2000023009
Data processing Affymetrix MAS 5.0 algorithm
 
Submission date Jul 07, 2008
Last update date Nov 21, 2008
Contact name Padmalatha Reddy
E-mail(s) [email protected]
Organization name WYETH
Street address 35 Cambridgepark Drive
City Cambridge
State/province MA
ZIP/Postal code 02140
Country USA
 
Platform ID GPL75
Series (1)
GSE12024 Effect of Sirolimus treatment on lupus nephritis in NZB/W F1 female mice

Data table header descriptions
ID_REF Affymetrix Probeset
VALUE MAS 5.0 Signal value
DETECTION P-VALUE MAS 5.0 Detection p-value

Data table
ID_REF VALUE DETECTION P-VALUE
AA000151_at 56.824131 0.116113
AA004127_at 16.043276 0.48511
AA009039_at 43.419884 0.313723
AA014405_at 4.882113 0.852061
AA014745_at 45.525311 1.95E-4
AA014816_s_at 56.659576 0.239063
AA016480_at 3.646053 0.834139
AA016517_s_at 64.804718 0.340661
AA016609_at 22.920685 0.013811
AA023300_at 105.893181 2.25E-4
AA023445_at 122.218979 0.108979
AA023577_at 17.283043 0.772364
AA024154_s_at 57.550827 0.116113
AA027411_s_at 32.781029 0.470241
AA027702_at 107.951019 0.131361
AA028265_s_at 4.448015 0.988616
AA028280_at 3.348835 0.760937
AA028426_at 42.478603 0.617401
AA028728_s_at 6.461181 0.995516
AA030220_at 55.673702 0.078002

Total number of rows: 6584

Table truncated, full table size 203 Kbytes.




Supplementary file Size Download File type/resource
GSM303979.cel.gz 2.2 Mb (ftp)(http) CEL
Processed data included within Sample table

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