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Sample GSM303961 Query DataSets for GSM303961
Status Public on Nov 21, 2008
Title SLE-7 #1 @36wks, asymptomatic on treatment with sirolimus (-2101366109)
Sample type RNA
 
Source name SLE-7 #1 @36wks
Organism Mus musculus
Characteristics Disease_status:asymptomatic on treatment with sirolimus
Gender:Female
Quality__3'/5'_Mean:1.15
Quality__Absent_(%):60.34
Quality__Absent_(%)_Dev.:1.3
Quality__Background_Mean_Dev.:0.5
Quality__Classification:Medium
Quality__Defective_Area_(%):0.11
Quality__Distortion_Severity:0.02
Quality__Gradient_Severity:0.02
Quality__Outlier_Area_(%):0.06
Quality__Scaling_Factor:0.24
Quality__Scaling_Factor_Dev.:0.54
RNA_source_key:-2101366109
Strain:NZB/W F1
Timepoint:36wks
Tissue:Kidney
Treatment:Rapamycin
Extracted molecule polyA RNA
Extraction protocol RNA was extracted from mouse kidney
Label biotin
Label protocol Affymetrix in-vitro labeling protocol
 
Hybridization protocol Affymetrix standard hybridization protocol
Scan protocol Affymetrix standard scan protocol
Description Cohort ID = 3:2000023007
Data processing Affymetrix MAS 5.0 algorithm
 
Submission date Jul 07, 2008
Last update date Nov 21, 2008
Contact name Padmalatha Reddy
E-mail(s) [email protected]
Organization name WYETH
Street address 35 Cambridgepark Drive
City Cambridge
State/province MA
ZIP/Postal code 02140
Country USA
 
Platform ID GPL75
Series (1)
GSE12024 Effect of Sirolimus treatment on lupus nephritis in NZB/W F1 female mice

Data table header descriptions
ID_REF Affymetrix Probeset
VALUE MAS 5.0 Signal value
DETECTION P-VALUE MAS 5.0 Detection p-value

Data table
ID_REF VALUE DETECTION P-VALUE
AA000151_at 62.486889 0.156732
AA004127_at 10.12213 0.58862
AA009039_at 62.204086 0.131361
AA014405_at 3.850132 0.843268
AA014745_at 37.444561 1.95E-4
AA014816_s_at 11.333164 0.327079
AA016480_at 3.938549 0.772364
AA016517_s_at 86.262634 0.185131
AA016609_at 16.206408 0.185131
AA023300_at 81.862289 0.001796
AA023445_at 154.937546 0.340661
AA023577_at 14.120083 0.814869
AA024154_s_at 43.153446 0.227636
AA027411_s_at 70.198456 0.156732
AA027702_at 106.150322 0.116113
AA028265_s_at 5.94571 0.941556
AA028280_at 13.408021 0.41138
AA028426_at 13.274927 0.891021
AA028728_s_at 12.349394 0.978098
AA030220_at 25.533392 0.354453

Total number of rows: 6584

Table truncated, full table size 203 Kbytes.




Supplementary file Size Download File type/resource
GSM303961.cel.gz 2.2 Mb (ftp)(http) CEL
Processed data included within Sample table

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