|
| Status |
Public on Jun 05, 2008 |
| Title |
gene expression of CTCF-depleted oocyte, replicate 3 |
| Sample type |
RNA |
| |
|
| Source name |
CTCF-depleted oocyte
|
| Organism |
Mus musculus |
| Characteristics |
CTCF-depleted fully-grown GV oocyte from transgenic mice
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Total RNA was extracted and purified using an Picopure kit (Arcturus).
|
| Label |
biotin
|
| Label protocol |
total RNA was processed to produce biotinylated cRNA targets using Affy Small Sample Target Labeling Assay Version II.
|
| |
|
| Hybridization protocol |
cRNA was fragmented following the Affymetrix protocol, and hybridized to the Affymetrix GeneChip Mouse Genome 430 2.0 arrays
|
| Scan protocol |
standard Affymetrix procedures
|
| Description |
Gene expression data from CTCF depleted GV oocyte
|
| Data processing |
Affymetrix Microarray Suite version 5.0
|
| |
|
| Submission date |
Jun 03, 2008 |
| Last update date |
Aug 28, 2018 |
| Contact name |
Hua Pan |
| E-mail(s) |
[email protected]
|
| Organization name |
University of Pennsylvania
|
| Department |
Department of Biology
|
| Street address |
415 S University Avenue
|
| City |
Philadelphia |
| State/province |
PA |
| ZIP/Postal code |
19104 |
| Country |
USA |
| |
|
| Platform ID |
GPL1261 |
| Series (1) |
| GSE11664 |
gene expression of CTCF-depleted mouse oocyte |
|
| Relations |
| Reanalyzed by |
GSE119085 |
