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Sample GSM291540 Query DataSets for GSM291540
Status Public on Jul 01, 2008
Title Day5 DV10 #3
Sample type RNA
 
Source name Day5 DV10
Organism Saccharomyces cerevisiae
Characteristics strain: DV10
replicate: 3
time: Day 5 of fermentation
Extracted molecule total RNA
Extraction protocol Hot-phenol method
Label Biotin
Label protocol Standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description N/A
Data processing Standard Affymetrix Procedure, MAS5.0
 
Submission date May 28, 2008
Last update date Aug 04, 2010
Contact name Debra Rossouw
E-mail(s) [email protected]
Organization name University of Stellenbosch
Department Institute for Wine Biotechnology
Lab Yeast
Street address Cnr Neethling and Victoria rd
City Stellenbosch
State/province Western Cape
ZIP/Postal code 7600
Country South Africa
 
Platform ID GPL2529
Series (1)
GSE11651 Transcriptomic profiling of five industrial wine yeast strains at three time points during allcoholic fermentation

Data table header descriptions
ID_REF
VALUE Intensity of gene expression
ABS_CALL Gene present or absent call
DETECTION P-VALUE p-value for detection

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 251.963 P 5.16732e-05
AFFX-BioB-M_at 318.89 P 4.42873e-05
AFFX-BioB-3_at 277.76 P 4.42873e-05
AFFX-BioC-5_at 540.219 P 4.42873e-05
AFFX-BioC-3_at 572.065 P 4.42873e-05
AFFX-BioDn-5_at 1525.73 P 4.42873e-05
AFFX-BioDn-3_at 3446.12 P 4.42873e-05
AFFX-CreX-5_at 8037.23 P 4.42873e-05
AFFX-CreX-3_at 7707.32 P 4.42873e-05
AFFX-DapX-5_at 150.895 P 8.14279e-05
AFFX-DapX-M_at 325.84 P 8.14279e-05
AFFX-DapX-3_at 634.001 P 4.42873e-05
AFFX-LysX-5_at 16.6626 P 0.00359458
AFFX-LysX-M_at 46.5053 P 0.000340305
AFFX-LysX-3_at 109.996 P 0.00010954
AFFX-PheX-5_at 27.0744 P 0.000389797
AFFX-PheX-M_at 43.7124 P 0.000146581
AFFX-PheX-3_at 76.6626 P 5.16732e-05
AFFX-ThrX-5_at 24.6945 P 0.00110197
AFFX-ThrX-M_at 46.7038 P 6.02111e-05

Total number of rows: 10928

Table truncated, full table size 338 Kbytes.




Supplementary file Size Download File type/resource
GSM291540.CEL.gz 987.0 Kb (ftp)(http) CEL
GSM291540.CHP.gz 57.2 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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