|
| Status |
Public on Feb 15, 2008 |
| Title |
Light damage replicate 3 |
| Sample type |
RNA |
| |
|
| Source name |
BALBc mouse retina RNA, light damaged
|
| Organism |
Mus musculus |
| Characteristics |
Retinal RNA from BALBc mice, light damaged for 6 hours under 6,000 lux white fluorescent light and allowed to recover for 24 hours in the dark.
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Total RNA from retinas was extracted with Trizol (Invitrogen, Carlsbad, CA) and the RNeasy Mini kit (Qiagen, Valencia, CA).
|
| Label |
biotin
|
| Label protocol |
Affymetrix protocol
Johns Hopkins Microarray Core Facility
http://www.microarray.jhmi.edu/
|
| |
|
| Hybridization protocol |
Affymetrix protocol
Johns Hopkins Microarray Core Facility
http://www.microarray.jhmi.edu/
|
| Scan protocol |
Affymetrix protocol
Johns Hopkins Microarray Core Facility
http://www.microarray.jhmi.edu/
|
| Description |
Light damage replicate 3
contact Amir Rattner (arattne1(at)jhmi.edu) for details
|
| Data processing |
RMA (bioconductor)
|
| |
|
| Submission date |
Feb 14, 2008 |
| Last update date |
Aug 28, 2018 |
| Contact name |
Amir Rattner |
| E-mail(s) |
[email protected]
|
| Phone |
410-955-4678
|
| Fax |
410-614-0728
|
| Organization name |
Johns Hopkins University
|
| Department |
Molecular Biology and Genetics
|
| Street address |
725 North Wolfe St., PCTB Room 805
|
| City |
Baltimore |
| State/province |
MD |
| ZIP/Postal code |
21205 |
| Country |
USA |
| |
|
| Platform ID |
GPL1261 |
| Series (2) |
| GSE10528 |
The retinal transcriptional response to light damage |
| GSE10577 |
The genomic response to retinal disease and injury: evidence for endothelin signaling from photoreceptors to glia. |
|
| Relations |
| Reanalyzed by |
GSE119085 |
