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GEO accession:
Sample GSM230914
Query DataSets for GSM230914
Status
Public on Sep 22, 2007
Title
Human epidermal keratinocytes treated with IL-1 for 48 hr
Sample type
RNA
Source name
Cultured epidermal keratinocytes
Organism
Homo sapiens
Characteristics
Grown in Rheinwald medium, switched to KBM for 24 hrs, treated with 25 ng/ml IL1 for 48 hrs
Treatment protocol
IL1 treated 48hr
Growth protocol
Standard
Extracted molecule
total RNA
Extraction protocol
Affymetrix standard
Label
Affymetrix standard
Label protocol
Affymetrix standard
Hybridization protocol
Affymetrix standard
Scan protocol
Affymetrix standard
Description
None
Data processing
Mas5.0
Submission date
Sep 20, 2007
Last update date
Aug 14, 2011
Contact name
Miroslav Blumenberg
E-mail(s)
[email protected]
Phone
212 263-5924
Organization name
NYU School of Medicine
Department
Dermatology
Lab
Blumenberg
Street address
455 First Ave #874
City
New York
State/province
NY
ZIP/Postal code
10016
Country
USA
Platform ID
GPL571
Series (1)
GSE9120
IL-1 treatment of human epidermal keratinocytes
Data table header descriptions
ID_REF
VALUE
MAS5.0 signal intensities
ABS_CALL
present or absent
DETECTION P-VALUE
abs call p value
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
634.36
P
0.00179591
AFFX-BioB-M_at
828.217
P
0.000753643
AFFX-BioB-3_at
543.378
P
0.002867
AFFX-BioC-5_at
1903.85
P
5.16732e-05
AFFX-BioC-3_at
2272.07
P
4.42873e-05
AFFX-BioDn-5_at
3935.94
P
4.42873e-05
AFFX-BioDn-3_at
6077.03
P
5.16732e-05
AFFX-CreX-5_at
15767.5
P
4.42873e-05
AFFX-CreX-3_at
17987.7
P
4.42873e-05
AFFX-DapX-5_at
35.6261
A
0.287726
AFFX-DapX-M_at
73.9038
A
0.455413
AFFX-DapX-3_at
12.6845
A
0.897874
AFFX-LysX-5_at
6.65345
A
0.963493
AFFX-LysX-M_at
54.5566
A
0.559354
AFFX-LysX-3_at
31.459
A
0.659339
AFFX-PheX-5_at
40.3997
A
0.41138
AFFX-PheX-M_at
44.469
A
0.659391
AFFX-PheX-3_at
47.9169
A
0.544587
AFFX-ThrX-5_at
13.8386
A
0.9273
AFFX-ThrX-M_at
63.8213
A
0.470238
Total number of rows:
22277
Table truncated, full table size
666 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM230914.CEL.gz
1.6 Mb
(ftp)
(http)
CEL
GSM230914.CHP.gz
435.8 Kb
(ftp)
(http)
CHP
Processed data included within Sample table
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