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GEO accession:
Sample GSM230880
Query DataSets for GSM230880
Status
Public on Sep 22, 2007
Title
Human epidermal keratinocytes controls 1 hr
Sample type
RNA
Source name
Cultured epidermal keratinocytes
Organism
Homo sapiens
Characteristics
Grown in Rheinwald medium, switched to KBM for 24 hrs,
Treatment protocol
Untreated control, 1hr
Growth protocol
Standard
Extracted molecule
total RNA
Extraction protocol
Affymetrix standard
Label
Affymetrix standard
Label protocol
Affymetrix standard
Hybridization protocol
Affymetrix standard
Scan protocol
Affymetrix standard
Description
None
Data processing
Mas5.0
Submission date
Sep 20, 2007
Last update date
Aug 14, 2011
Contact name
Miroslav Blumenberg
E-mail(s)
[email protected]
Phone
212 263-5924
Organization name
NYU School of Medicine
Department
Dermatology
Lab
Blumenberg
Street address
455 First Ave #874
City
New York
State/province
NY
ZIP/Postal code
10016
Country
USA
Platform ID
GPL571
Series (1)
GSE9120
IL-1 treatment of human epidermal keratinocytes
Data table header descriptions
ID_REF
VALUE
MAS5.0 signal intensities
ABS_CALL
present absent call
DETECTION P-VALUE
ABS call p value
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
586.423
P
0.000753643
AFFX-BioB-M_at
603.443
P
0.000509415
AFFX-BioB-3_at
464.298
P
0.002867
AFFX-BioC-5_at
2070.83
P
6.02111e-05
AFFX-BioC-3_at
2198.83
P
4.42873e-05
AFFX-BioDn-5_at
3208.95
P
4.42873e-05
AFFX-BioDn-3_at
6756.65
P
7.00668e-05
AFFX-CreX-5_at
13428.4
P
4.42873e-05
AFFX-CreX-3_at
17258.9
P
4.42873e-05
AFFX-DapX-5_at
45.4232
A
0.195266
AFFX-DapX-M_at
6.36037
A
0.916408
AFFX-DapX-3_at
8.37941
A
0.986189
AFFX-LysX-5_at
6.78973
A
0.904352
AFFX-LysX-M_at
6.40059
A
0.973889
AFFX-LysX-3_at
60.6688
A
0.5
AFFX-PheX-5_at
51.1329
A
0.411373
AFFX-PheX-M_at
11.1832
A
0.794268
AFFX-PheX-3_at
36.1899
A
0.772364
AFFX-ThrX-5_at
5.59094
A
0.998407
AFFX-ThrX-M_at
12.989
A
0.921998
Total number of rows:
22277
Table truncated, full table size
667 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM230880.CEL.gz
1.6 Mb
(ftp)
(http)
CEL
GSM230880.CHP.gz
123.2 Kb
(ftp)
(http)
CHP
Processed data included within Sample table
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