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Sample GSM2038747 Query DataSets for GSM2038747
Status Public on Jan 20, 2016
Title SJETV057
Sample type RNA
 
Source name Leukemia cells
Organism Homo sapiens
Characteristics source: bone marrow
Extracted molecule total RNA
Extraction protocol Trizol extraction of total RNA was performed according to the manufacturer's instructions.
Label Hy5
Label protocol miRCURY Power labeling kit used according to manufacturer's (Exiqon) instructions
 
Hybridization protocol hybridization was done at 56 degrees Celsius for 16 hours followed by washing on an HS Pro instrument from Tecan.
Scan protocol Scanning was performed using an Agilent G2505B scanning system
Description processed signal intensity
Data processing raw counts were processed using the limma package(version 3.6.9) from Bioconductor
 
Submission date Jan 13, 2016
Last update date Jan 20, 2016
Contact name William Evans
E-mail(s) [email protected]
Organization name St Jude Children's Research Hospital
Department Pharmaceutical Sciences
Street address 262 Danny Thomas Place
City Memphis
State/province TN
ZIP/Postal code 38105
Country USA
 
Platform ID GPL7722
Series (1)
GSE76849 miRNA from leukemia cells

Data table header descriptions
ID_REF
VALUE processed signal intensity

Data table
ID_REF VALUE
17519 7.580748594
17541 7.358058281
42485 7.319377346
17415 8.055774619
42545 7.380862699
17283 7.282492528
17306 7.490870743
42882 7.294179549
27537 9.775991851
17655 7.382349086
17623 7.438848234
42897 7.35568017
17358 8.620175834
42773 7.271257797
42943 10.31511369
42466 7.602947394
17657 7.295764365
42522 10.67566772
42613 7.576219931
42974 10.24380862

Total number of rows: 1276

Table truncated, full table size 22 Kbytes.




Supplementary file Size Download File type/resource
GSM2038747_SWP000_SWP207_miR10_6128Cv60.gpr.gz 471.3 Kb (ftp)(http) GPR
Processed data included within Sample table

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