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Sample GSM1894776 Query DataSets for GSM1894776
Status Public on Aug 09, 2018
Title Control_06
Sample type RNA
 
Source name Whole Blood from healthy control patient
Organism Homo sapiens
Characteristics category: Control
dataset: Validation
gender: Female
Extracted molecule total RNA
Extraction protocol Standard PAXgene® blood RNA extraction kit protocol (Qiagen).
Label biotin
Label protocol Standard Illumina TotalPrep RNA Amplification kits (Applied Biosystems).
 
Hybridization protocol Standard Illumina hybridisation protocol.
Scan protocol Standard Illumina scanning protocol.
Data processing The data were normalised using RSN, after background subtraction. The software used for data normalization was 'R' Language and Environment for Statistical Computing (R) 3.2.2
 
Submission date Sep 25, 2015
Last update date Aug 09, 2018
Contact name Victoria Wright
E-mail(s) [email protected]
Organization name Imperial College London
Department Paediatrics
Lab Wright Fleming Institute
Street address Norfolk Place
City London
ZIP/Postal code W2 1PG
Country United Kingdom
 
Platform ID GPL6947
Series (2)
GSE73462 Diagnosis of Kawasaki Disease in children using host RNA expression [Validation_HT12V3_Dataset]
GSE73464 Diagnosis of Kawasaki Disease in children using host RNA expression

Data table header descriptions
ID_REF
VALUE Illumina calculated signal intensity
Control_06_Detection_Pval

Data table
ID_REF VALUE Control_06_Detection_Pval
ILMN_1762337 5.55335214535322 0.9697
ILMN_2055271 6.10194193215713 0.0553399999999999
ILMN_1736007 5.93091224345507 0.35046
ILMN_2383229 6.01230995088681 0.20026
ILMN_1806310 5.80282569879977 0.65349
ILMN_1779670 5.93976085420429 0.3386
ILMN_2321282 6.0737756668526 0.09881
ILMN_1671474 5.89408867453736 0.44664
ILMN_1772582 5.61214532601451 0.94203
ILMN_1735698 6.04002304586333 0.15152
ILMN_1653355 5.9912518070027 0.23979
ILMN_1717783 5.65382947866083 0.91173
ILMN_1705025 5.92492443099986 0.36495
ILMN_1814316 5.64257735261508 0.92227
ILMN_2359168 5.98876711856191 0.24638
ILMN_1731507 5.9158205630888 0.38208
ILMN_1787689 6.00324835243065 0.21871
ILMN_1745607 5.93976085420429 0.33729
ILMN_2136495 5.53323190856971 0.97628
ILMN_1668111 5.66128330271668 0.90382

Total number of rows: 48803

Table truncated, full table size 1842 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
Processed data are available on Series record

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