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Sample GSM1894771 Query DataSets for GSM1894771
Status Public on Aug 09, 2018
Title Control_01
Sample type RNA
 
Source name Whole Blood from healthy control patient
Organism Homo sapiens
Characteristics category: Control
dataset: Validation
gender: Male
Extracted molecule total RNA
Extraction protocol Standard PAXgene® blood RNA extraction kit protocol (Qiagen).
Label biotin
Label protocol Standard Illumina TotalPrep RNA Amplification kits (Applied Biosystems).
 
Hybridization protocol Standard Illumina hybridisation protocol.
Scan protocol Standard Illumina scanning protocol.
Data processing The data were normalised using RSN, after background subtraction. The software used for data normalization was 'R' Language and Environment for Statistical Computing (R) 3.2.2
 
Submission date Sep 25, 2015
Last update date Aug 09, 2018
Contact name Victoria Wright
E-mail(s) [email protected]
Organization name Imperial College London
Department Paediatrics
Lab Wright Fleming Institute
Street address Norfolk Place
City London
ZIP/Postal code W2 1PG
Country United Kingdom
 
Platform ID GPL6947
Series (2)
GSE73462 Diagnosis of Kawasaki Disease in children using host RNA expression [Validation_HT12V3_Dataset]
GSE73464 Diagnosis of Kawasaki Disease in children using host RNA expression

Data table header descriptions
ID_REF
VALUE Illumina calculated signal intensity
Control_01_Detection_Pval

Data table
ID_REF VALUE Control_01_Detection_Pval
ILMN_1762337 5.86256921008007 0.44796
ILMN_2055271 6.12744288263812 0.04216
ILMN_1736007 5.92486361028553 0.32148
ILMN_2383229 5.78724036813346 0.6469
ILMN_1806310 5.69527027560777 0.8195
ILMN_1779670 5.97245203884145 0.26482
ILMN_2321282 6.09729724079186 0.07905
ILMN_1671474 5.90433364226611 0.36364
ILMN_1772582 5.89840607768092 0.37286
ILMN_1735698 6.02642467098219 0.16733
ILMN_1653355 6.14015614075798 0.0303
ILMN_1717783 5.88947910150897 0.39657
ILMN_1705025 6.02861581306215 0.16337
ILMN_1814316 5.79935912255162 0.61792
ILMN_2359168 5.75681041484396 0.69565
ILMN_1731507 5.6890580280189 0.8274
ILMN_1787689 5.9982616550408 0.22398
ILMN_1745607 5.73231306256304 0.75231
ILMN_2136495 5.67034894427583 0.86166
ILMN_1668111 5.6325737205866 0.917

Total number of rows: 48803

Table truncated, full table size 1787 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
Processed data are available on Series record

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