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Sample GSM1855816 Query DataSets for GSM1855816
Status Public on Jan 12, 2016
Title P6- Renal Medulla
Sample type RNA
 
Source name P6- Renal Medulla
Organism Mus musculus
Characteristics tissue type: Postnatal renal medulla
strain: CD1
gender: male
Extracted molecule total RNA
Extraction protocol Total RNA was extracted with the use of a QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description P6- Renal Medulla
Data processing The data were vst transformed and rsn normalised with lumi in R
 
Submission date Aug 17, 2015
Last update date Jan 12, 2016
Contact name Dr. Yu Leng Phua
Organization name Icahn School of Medicine at Mount Sinai
Street address 1 Gustave L. Levy Pl
City New York City
State/province New York
ZIP/Postal code 10029
Country USA
 
Platform ID GPL6105
Series (1)
GSE72128 Microarray profiling of renal medulla / papilla and cortex during postnatal development

Data table header descriptions
ID_REF
VALUE vst transformed and rsn normalised
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1212602 7.836975651 0.79164
ILMN_1212603 7.878909078 0.71803
ILMN_1212605 8.703305095 0
ILMN_1212607 8.166475178 0.02745
ILMN_1212608 7.739228116 0.91017
ILMN_1212610 7.857899062 0.75795
ILMN_1212612 8.355174586 0.00062
ILMN_1212614 7.969535912 0.53899
ILMN_1212616 8.168920229 0.02371
ILMN_1212619 8.512792164 0
ILMN_1212623 7.855383774 0.76107
ILMN_1212625 9.085865566 0
ILMN_1212626 10.85464775 0
ILMN_1212628 8.090787724 0.25577
ILMN_1212632 8.261868645 0.00187
ILMN_1212633 8.264265462 0.00187
ILMN_1212636 10.76089266 0
ILMN_1212637 10.93292759 0
ILMN_1212639 8.273678965 0.00125
ILMN_1212644 8.018710176 0.42982

Total number of rows: 46630

Table truncated, full table size 1435 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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