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Sample GSM17043 Query DataSets for GSM17043
Status Public on Apr 01, 2004
Title WTK1 NO 12h:WTK1 U, rep 1
Sample type RNA
 
Channel 1
Source name WTK1 NO 12h
Organism Homo sapiens
Extracted molecule total RNA
 
Channel 2
Source name WTK1 U
Organism Homo sapiens
Extracted molecule total RNA
 
 
Description mAdb experiment ID: 31350
WTK1 cells treated with 390 micromol nitric oxide and harvested 12 hours after the end of treatment versus untreated WTK1 cells.
Array Print: Hs-UniGEM2-v4.0p6-052402
cell_type: lymphoblastoid
cell_line: WTK1
p53 allele: mutant M237I
treatment_agent: nitric oxide
treatment_dose: 390 micromol
treatment_time: 12 hours
 
Submission date Feb 18, 2004
Last update date May 28, 2005
Contact name Ana I Robles
E-mail(s) [email protected]
Phone 301-496-1729
Organization name National Cancer Institute/NIH
Lab Laboratory of Human Carcinogenesis
Street address 37 Convent Dr 37/3060D
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Platform ID GPL257
Series (1)
GSE1064 TK6 and WTK1 LCLs plus NO

Data table header descriptions
ID_REF NCI mAdb well id
VALUE log ratio (log2 of PRE_VALUE)
Slide_block Array block location
Slide_column Array column location
Slide_row Array row location
CH1_MEAN Sample 1 (Red Channel) Mean Intensity
CH1_SD Sample 1 (Red Channel) Standard Deviation
CH1_BKD_Median Sample 1 (Red Channel) Median Background Level
CH1_BKD_SD Sample 1 (Red Channel) Background Standard Deviation
CH2_MEAN Sample 2 (Green Channel) Mean Intensity
CH2_SD Sample 2 Green Channel) Standard Deviation
CH2_BKD_Median Sample 2 Green Channel) Median Background Level
CH2_BKD_SD Sample 2 Green Channel) Background Standard Deviation
Flag Quality flag 0->good, -50->Not found, -100->Bad
PRE_VALUE Calibrated Ratio (Sample_target_source1 / Sample_target_source2 )

Data table
ID_REF VALUE Slide_block Slide_column Slide_row CH1_MEAN CH1_SD CH1_BKD_Median CH1_BKD_SD CH2_MEAN CH2_SD CH2_BKD_Median CH2_BKD_SD Flag PRE_VALUE
159762 1.9631043 1 1 1 2636 979 645 165 1017 225 414 90 0 3.899
159763 0.5558163 2 1 1 4941 712 649 173 3872 964 424 80 0 1.470
159764 0.1583373 3 1 1 8546 2130 706 176 8738 2089 441 101 0 1.116
159765 -0.6170563 4 1 1 10250 2131 691 206 17728 4858 429 124 0 0.652
159766 0.6744613 1 2 1 4523 1022 647 172 3287 629 419 89 0 1.596
159767 0.7756833 2 2 1 3102 1003 649 185 2124 558 432 85 0 1.712
159768 0.1852323 3 2 1 3956 896 694 173 3817 775 430 90 0 1.137
159769 0.0786103 4 2 1 4153 1485 692 190 4278 1687 409 95 0 1.056
159770 1.4776773 1 3 1 3039 1147 643 330 1431 313 415 85 0 2.785
159771 0.4016303 2 3 1 3772 1227 635 160 3225 915 421 84 0 1.321
159772 0.3684893 3 3 1 3418 1030 686 171 2924 831 426 87 0 1.291
159773 0.8139353 4 3 1 1973 724 700 215 1263 438 408 92 0 1.758
159774 0.0579703 1 4 1 5193 935 640 313 5578 1573 412 77 0 1.041
159775 1.1718473 2 4 1 1805 1294 620 153 1040 448 419 68 0 2.253
159776 0.5655973 3 4 1 3866 1110 672 166 2971 853 423 84 0 1.480
159777 0.5420103 4 4 1 1583 581 699 175 1124 412 407 87 0 1.456
159778 1.2738143 1 5 1 3179 607 654 165 1637 293 404 71 0 2.418
159779 0.7782093 2 5 1 2901 897 654 2080 1974 415 427 520 0 1.715
159780 0.5878453 3 5 1 2259 787 668 172 1674 487 424 81 0 1.503
159781 0.4730083 4 5 1 1910 823 731 215 1416 481 413 166 0 1.388

Total number of rows: 9128

Table truncated, full table size 608 Kbytes.




Supplementary data files not provided
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