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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Sep 29, 2015 |
| Title |
patient4_normal |
| Sample type |
RNA |
| |
|
| Source name |
normal oviduct
|
| Organism |
Homo sapiens |
| Characteristics |
patient no.: patient 4
tissue: LCM from cryosection (normal oviduct)
|
| Extracted molecule |
total RNA |
| Extraction protocol |
PicoPure® RNA Isolation Kit (Life Technologies)
|
| Label |
Biotin
|
| Label protocol |
Encore® Biotin Module (Nugen)
|
| |
|
| Hybridization protocol |
GeneChip® Hybridization, Wash, and Stain Kit (affymetrix)
|
| Scan protocol |
GeneChip® Hybridization, Wash, and Stain Kit (affymetrix)
|
| Description |
LCM from cryosection (normal oviduct)
|
| Data processing |
Expression console, Partek Genome Suite 6.6
HuEx-1_0-st-v2.r2.pgf
HuEx-1_0-st-v2.r2.dt1.hg18.core.mps
|
| |
|
| Submission date |
Jun 01, 2015 |
| Last update date |
Sep 29, 2015 |
| Contact name |
Frank McKeon |
| E-mail(s) |
[email protected]
|
| Phone |
8608372486
|
| Organization name |
University of Houston
|
| Department |
Biology and Biochemistry
|
| Street address |
3455 Cullen Blvd
|
| City |
Houston |
| State/province |
TX |
| ZIP/Postal code |
77004 |
| Country |
USA |
| |
|
| Platform ID |
GPL5175 |
| Series (1) |
| GSE69429 |
Molecular analysis of normal oviduct, STIC and invasive serous cancer |
|
| Data table header descriptions |
| ID_REF |
|
| VALUE |
signal intensity (log2 value) RMA |
| Data table |
| ID_REF |
VALUE |
| 3881686 |
5.56262 |
| 2672712 |
6.03632 |
| 2842570 |
4.81253 |
| 3526544 |
3.71339 |
| 2902531 |
4.13208 |
| 2402942 |
5.80539 |
| 3382216 |
4.47788 |
| 3771800 |
5.9286 |
| 2427469 |
3.30084 |
| 2392945 |
5.46187 |
| 2453006 |
4.83588 |
| 3552083 |
5.10768 |
| 3416651 |
4.28232 |
| 2562821 |
6.49665 |
| 3721851 |
5.81207 |
| 3442176 |
5.31281 |
| 2477438 |
3.49232 |
| 2926969 |
4.02075 |
| 3026969 |
4.73269 |
| 3796335 |
4.78275 |
Total number of rows: 22011
Table truncated, full table size 341 Kbytes.
| Supplementary file |
Size |
Download |
File type/resource |
| GSM1701064_patient4_normal.CEL.gz |
21.2 Mb |
(ftp)(http) |
CEL |
| Processed data included within Sample table |
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