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Sample GSM1701063 Query DataSets for GSM1701063
Status Public on Sep 29, 2015
Title patient4_invasive_SC
Sample type RNA
 
Source name invasive serous ovarian cancer
Organism Homo sapiens
Characteristics patient no.: patient 4
tissue: LCM from cryosection (invasive SC)
Extracted molecule total RNA
Extraction protocol PicoPure® RNA Isolation Kit (Life Technologies)
Label Biotin
Label protocol Encore® Biotin Module (Nugen)
 
Hybridization protocol GeneChip® Hybridization, Wash, and Stain Kit (affymetrix)
Scan protocol GeneChip® Hybridization, Wash, and Stain Kit (affymetrix)
Description LCM from cryosection (invasive SC)
Data processing Expression console, Partek Genome Suite 6.6
HuEx-1_0-st-v2.r2.pgf
HuEx-1_0-st-v2.r2.dt1.hg18.core.mps
 
Submission date Jun 01, 2015
Last update date Sep 29, 2015
Contact name Frank McKeon
E-mail(s) [email protected]
Phone 8608372486
Organization name University of Houston
Department Biology and Biochemistry
Street address 3455 Cullen Blvd
City Houston
State/province TX
ZIP/Postal code 77004
Country USA
 
Platform ID GPL5175
Series (1)
GSE69429 Molecular analysis of normal oviduct, STIC and invasive serous cancer

Data table header descriptions
ID_REF
VALUE signal intensity (log2 value) RMA

Data table
ID_REF VALUE
3881686 6.19399
2672712 6.52034
2842570 4.45246
3526544 3.89047
2902531 4.68534
2402942 5.96836
3382216 4.22344
3771800 5.87393
2427469 4.08763
2392945 5.74288
2453006 4.44305
3552083 5.03752
3416651 4.14087
2562821 6.90537
3721851 5.40894
3442176 6.6451
2477438 3.42778
2926969 3.69333
3026969 5.21228
3796335 5.16654

Total number of rows: 22011

Table truncated, full table size 341 Kbytes.




Supplementary file Size Download File type/resource
GSM1701063_patient4_invasive_SC.CEL.gz 20.9 Mb (ftp)(http) CEL
Processed data included within Sample table

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