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Sample GSM1638730 Query DataSets for GSM1638730
Status Public on Jun 01, 2015
Title KitW/Wv HFD, 3
Sample type RNA
 
Source name Mouse epididymal AT
Organism Mus musculus
Characteristics diet: HFD
background: WBB6F1 (WB X C57Bl/6)
genotype/variation: KitW/Wv
Treatment protocol Mice were fed a HFD (60% kcal from fat) or chow diet (6% fat) for 12 weeks
eAT was isolated after a 5h morning fast
Extracted molecule total RNA
Extraction protocol Total RNA was isolated using Quiagen RNA minikit
Label Biotin
Label protocol Standard Illumina label protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description Group 3
SAMPLE 14
Data processing Data was normalized using the Chipster 3.1.1 software (Genome studio) by the quatile method
 
Submission date Mar 20, 2015
Last update date Jun 01, 2015
Contact name Dario Alejandro Gutierrez
E-mail(s) [email protected]
Phone +496221424128
Organization name German Cancer Research center
Department Cellular Immunology
Street address Im Neuenheimer Feld 280
City Heidelberg
State/province BW
ZIP/Postal code 69120
Country Germany
 
Platform ID GPL17543
Series (1)
GSE67091 Hematopoietic Kit Deficiency, but not lack of mast cells, protects mice from onesity and insulin resistancel

Data table header descriptions
ID_REF
VALUE Quantile normalized
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1250052 159.0723799 2.31075E-09
ILMN_1251402 97.91170483 0.247856703
ILMN_3122480 90.98198381 0.872347769
ILMN_1230863 90.40952241 0.955974319
ILMN_2599935 328.5524427 1.07158E-18
ILMN_1249762 122.3474397 3.70368E-06
ILMN_2653194 102.0786651 0.024533249
ILMN_1227991 90.64687618 0.978507691
ILMN_2445236 103.4509341 0.035440848
ILMN_2675543 94.24575613 0.699574878
ILMN_2635314 97.36952546 0.298139107
ILMN_1212991 225.0683143 1.55972E-18
ILMN_2686883 102.084933 0.033295409
ILMN_1223534 98.25303966 0.225997117
ILMN_2514305 93.9014877 0.712111821
ILMN_2751818 91.84863117 0.910662042
ILMN_1217583 106.4245282 0.00041596
ILMN_1222597 89.73749572 0.988324636
ILMN_1242561 92.65409 0.875275629
ILMN_2728634 102.7293012 0.018448154

Total number of rows: 46237

Table truncated, full table size 1660 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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