GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM158347
Query DataSets for GSM158347
Status
Public on Nov 23, 2007
Title
HB162
Sample type
RNA
Source name
Human Breast Tumor
Organism
Homo sapiens
Characteristics
pCR - pathological complete response
Extracted molecule
total RNA
Extraction protocol
Qiagen RNeasy Mini Kit
Label
biotin
Label protocol
Standard Affymetrix procedure
Hybridization protocol
Standard Affymetrix procedure
Scan protocol
Standard Affymetrix procedure
Description
Series of 161 tumours
Data processing
RMA
Submission date
Jan 25, 2007
Last update date
Jun 06, 2022
Contact name
Mauro Delorenzi
E-mail(s)
[email protected]
Organization name
ISREC
Street address
155 Boveresses
City
Lausanne
ZIP/Postal code
1066
Country
Switzerland
Platform ID
GPL1352
Series (1)
GSE6861
Prediction of breast cancer pathological complete response to anthracycline/taxane chemotherapy.
Relations
Reanalyzed by
GSE205568
Data table header descriptions
ID_REF
VALUE
RMA-calculated signal intensity
Data table
ID_REF
VALUE
1053_3p_at
9.259539736318
117_3p_at
8.5132151275277
1494_3p_f_at
7.14309523900854
1552275_3p_s_at
7.64510826312661
1552281_3p_at
9.19204525544699
1552296_3p_at
6.02398050903998
1552302_3p_at
6.11631086361265
1552311_3p_a_at
8.44940195385762
1552321_3p_a_at
4.54028607869017
1552340_3p_at
6.64948071841951
1552343_3p_s_at
7.29021596834386
1552354_3p_at
7.03748694090422
1552476_3p_s_at
7.83220603497757
1552480_3p_s_at
4.37657844557653
1552504_3p_a_at
7.5939913336227
1552518_3p_s_at
6.43508121032403
1552528_3p_at
8.28765427326659
1552535_3p_at
7.78074406071099
1552566_3p_at
6.92234464144436
1552575_3p_a_at
7.72029995163965
Total number of rows:
61359
Table truncated, full table size
2190 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM158347.CEL.gz
8.9 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
