GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM158291
Query DataSets for GSM158291
Status
Public on Nov 23, 2007
Title
HB104
Sample type
RNA
Source name
Human Breast Tumor
Organism
Homo sapiens
Characteristics
npCR - no pathological complete response
Extracted molecule
total RNA
Extraction protocol
Qiagen RNeasy Mini Kit
Label
biotin
Label protocol
Standard Affymetrix procedure
Hybridization protocol
Standard Affymetrix procedure
Scan protocol
Standard Affymetrix procedure
Description
Series of 161 tumours
Data processing
RMA
Submission date
Jan 25, 2007
Last update date
Jun 06, 2022
Contact name
Mauro Delorenzi
E-mail(s)
[email protected]
Organization name
ISREC
Street address
155 Boveresses
City
Lausanne
ZIP/Postal code
1066
Country
Switzerland
Platform ID
GPL1352
Series (1)
GSE6861
Prediction of breast cancer pathological complete response to anthracycline/taxane chemotherapy.
Relations
Reanalyzed by
GSE205568
Data table header descriptions
ID_REF
VALUE
RMA-calculated signal intensity
Data table
ID_REF
VALUE
1053_3p_at
8.71629174135303
117_3p_at
8.04192517282454
1494_3p_f_at
7.34262180786061
1552275_3p_s_at
8.02316228651696
1552281_3p_at
9.28576580360469
1552296_3p_at
5.65297521664706
1552302_3p_at
5.86166617081558
1552311_3p_a_at
8.1654251288264
1552321_3p_a_at
4.72364151838444
1552340_3p_at
6.65814430175831
1552343_3p_s_at
7.15012410899837
1552354_3p_at
7.87835761878825
1552476_3p_s_at
7.98287565682472
1552480_3p_s_at
4.39054822304151
1552504_3p_a_at
7.63511523213543
1552518_3p_s_at
5.99290960428674
1552528_3p_at
8.11313969772528
1552535_3p_at
7.92239522579087
1552566_3p_at
7.02551438706841
1552575_3p_a_at
7.35295272415404
Total number of rows:
61359
Table truncated, full table size
2189 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM158291.CEL.gz
9.1 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
