GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM158288
Query DataSets for GSM158288
Status
Public on Nov 23, 2007
Title
HB101bis
Sample type
RNA
Source name
Human Breast Tumor
Organism
Homo sapiens
Characteristics
pCR - pathological complete response
Extracted molecule
total RNA
Extraction protocol
Qiagen RNeasy Mini Kit
Label
biotin
Label protocol
Standard Affymetrix procedure
Hybridization protocol
Standard Affymetrix procedure
Scan protocol
Standard Affymetrix procedure
Description
Series of 161 tumours
Data processing
RMA
Submission date
Jan 25, 2007
Last update date
Jun 06, 2022
Contact name
Mauro Delorenzi
E-mail(s)
[email protected]
Organization name
ISREC
Street address
155 Boveresses
City
Lausanne
ZIP/Postal code
1066
Country
Switzerland
Platform ID
GPL1352
Series (1)
GSE6861
Prediction of breast cancer pathological complete response to anthracycline/taxane chemotherapy.
Relations
Reanalyzed by
GSE205568
Data table header descriptions
ID_REF
VALUE
RMA-calculated signal intensity
Data table
ID_REF
VALUE
1053_3p_at
8.68628114227183
117_3p_at
7.85696075431533
1494_3p_f_at
7.62085214319935
1552275_3p_s_at
7.94156609963982
1552281_3p_at
9.14814185296015
1552296_3p_at
6.01344908762286
1552302_3p_at
5.08941501649557
1552311_3p_a_at
8.0879382324164
1552321_3p_a_at
4.58852654371906
1552340_3p_at
6.53607830574846
1552343_3p_s_at
6.9276430444451
1552354_3p_at
7.5112935984202
1552476_3p_s_at
7.64019847764517
1552480_3p_s_at
3.97405094567040
1552504_3p_a_at
7.73323706436716
1552518_3p_s_at
5.23111330076995
1552528_3p_at
8.47570032209542
1552535_3p_at
7.8441582180955
1552566_3p_at
7.15196952352583
1552575_3p_a_at
9.18930755795247
Total number of rows:
61359
Table truncated, full table size
2189 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM158288.CEL.gz
8.8 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
