GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM158246
Query DataSets for GSM158246
Status
Public on Nov 23, 2007
Title
HB59bis
Sample type
RNA
Source name
Human Breast Tumor
Organism
Homo sapiens
Characteristics
npCR - no pathological complete response
Extracted molecule
total RNA
Extraction protocol
Qiagen RNeasy Mini Kit
Label
biotin
Label protocol
Standard Affymetrix procedure
Hybridization protocol
Standard Affymetrix procedure
Scan protocol
Standard Affymetrix procedure
Description
Series of 161 tumours
Data processing
RMA
Submission date
Jan 25, 2007
Last update date
Jun 06, 2022
Contact name
Mauro Delorenzi
E-mail(s)
[email protected]
Organization name
ISREC
Street address
155 Boveresses
City
Lausanne
ZIP/Postal code
1066
Country
Switzerland
Platform ID
GPL1352
Series (1)
GSE6861
Prediction of breast cancer pathological complete response to anthracycline/taxane chemotherapy.
Relations
Reanalyzed by
GSE205568
Data table header descriptions
ID_REF
VALUE
RMA-calculated signal intensity
Data table
ID_REF
VALUE
1053_3p_at
8.98266051837857
117_3p_at
7.81788689908177
1494_3p_f_at
8.28066775504295
1552275_3p_s_at
7.87786760512473
1552281_3p_at
9.34380044846252
1552296_3p_at
6.03593449551093
1552302_3p_at
5.89509315356277
1552311_3p_a_at
8.30408196444551
1552321_3p_a_at
5.03973811470324
1552340_3p_at
6.48411839161382
1552343_3p_s_at
6.73638346806594
1552354_3p_at
7.46478559311636
1552476_3p_s_at
7.95292798033533
1552480_3p_s_at
3.84280267131078
1552504_3p_a_at
7.9051480381533
1552518_3p_s_at
5.63312494633298
1552528_3p_at
8.2713832320955
1552535_3p_at
7.95155401746086
1552566_3p_at
6.84279156853342
1552575_3p_a_at
9.23228482164958
Total number of rows:
61359
Table truncated, full table size
2189 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM158246.CEL.gz
8.5 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
