GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM158217
Query DataSets for GSM158217
Status
Public on Nov 23, 2007
Title
HB30bis
Sample type
RNA
Source name
Human Breast Tumor
Organism
Homo sapiens
Characteristics
npCR - no pathological complete response
Extracted molecule
total RNA
Extraction protocol
Qiagen RNeasy Mini Kit
Label
biotin
Label protocol
Standard Affymetrix procedure
Hybridization protocol
Standard Affymetrix procedure
Scan protocol
Standard Affymetrix procedure
Description
Series of 161 tumours
Data processing
RMA
Submission date
Jan 25, 2007
Last update date
Jun 06, 2022
Contact name
Mauro Delorenzi
E-mail(s)
[email protected]
Organization name
ISREC
Street address
155 Boveresses
City
Lausanne
ZIP/Postal code
1066
Country
Switzerland
Platform ID
GPL1352
Series (1)
GSE6861
Prediction of breast cancer pathological complete response to anthracycline/taxane chemotherapy.
Relations
Reanalyzed by
GSE205568
Data table header descriptions
ID_REF
VALUE
RMA-calculated signal intensity
Data table
ID_REF
VALUE
1053_3p_at
9.16874054363972
117_3p_at
8.10127136627562
1494_3p_f_at
7.6416319443669
1552275_3p_s_at
7.96226309913214
1552281_3p_at
9.3582479155659
1552296_3p_at
6.09495710612691
1552302_3p_at
5.95603775156945
1552311_3p_a_at
8.38396626210741
1552321_3p_a_at
4.93083070023503
1552340_3p_at
6.7229428787636
1552343_3p_s_at
7.6395121189715
1552354_3p_at
7.95546957090271
1552476_3p_s_at
7.81973195677783
1552480_3p_s_at
4.12871429122851
1552504_3p_a_at
7.6349430484334
1552518_3p_s_at
5.4498536180106
1552528_3p_at
8.18392794735901
1552535_3p_at
7.78582406606547
1552566_3p_at
6.8034557912513
1552575_3p_a_at
7.73673985120107
Total number of rows:
61359
Table truncated, full table size
2189 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM158217.CEL.gz
8.6 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
