GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM158208
Query DataSets for GSM158208
Status
Public on Nov 23, 2007
Title
HB21bis
Sample type
RNA
Source name
Human Breast Tumor
Organism
Homo sapiens
Characteristics
pCR - pathological complete response
Extracted molecule
total RNA
Extraction protocol
Qiagen RNeasy Mini Kit
Label
biotin
Label protocol
Standard Affymetrix procedure
Hybridization protocol
Standard Affymetrix procedure
Scan protocol
Standard Affymetrix procedure
Description
Series of 161 tumours
Data processing
RMA
Submission date
Jan 25, 2007
Last update date
Jun 06, 2022
Contact name
Mauro Delorenzi
E-mail(s)
[email protected]
Organization name
ISREC
Street address
155 Boveresses
City
Lausanne
ZIP/Postal code
1066
Country
Switzerland
Platform ID
GPL1352
Series (1)
GSE6861
Prediction of breast cancer pathological complete response to anthracycline/taxane chemotherapy.
Relations
Reanalyzed by
GSE205568
Data table header descriptions
ID_REF
VALUE
RMA-calculated signal intensity
Data table
ID_REF
VALUE
1053_3p_at
8.58392591819818
117_3p_at
8.27334953819756
1494_3p_f_at
7.58455336269353
1552275_3p_s_at
7.8201012270787
1552281_3p_at
9.52163548074246
1552296_3p_at
5.53610345836989
1552302_3p_at
5.89198129214929
1552311_3p_a_at
8.32666433162023
1552321_3p_a_at
5.15070311165769
1552340_3p_at
6.66006452155738
1552343_3p_s_at
7.02807982743009
1552354_3p_at
7.8328977911099
1552476_3p_s_at
8.45961396387224
1552480_3p_s_at
4.16225431876806
1552504_3p_a_at
7.71776912703053
1552518_3p_s_at
5.31035755420976
1552528_3p_at
8.1665394378062
1552535_3p_at
7.8971679445681
1552566_3p_at
6.80887049632917
1552575_3p_a_at
8.20732173585134
Total number of rows:
61359
Table truncated, full table size
2189 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM158208.CEL.gz
8.7 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
