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Sample GSM15732 Query DataSets for GSM15732
Status Public on Jan 27, 2004
Title NeverSmoker 78
Sample type RNA
 
Source name Bronchial Epithelia
Organism Homo sapiens
Characteristics tissue: Bronchial Epithelium
Extracted molecule total RNA
Extraction protocol RNA was extracted by using TRIzol Reagent (Invitrogen) according to the manufacturer's protocol
Label protocol Affymetrix Suggested Protocol
 
Hybridization protocol Affymetrix Suggested Protocol
Scan protocol Affymetrix Suggested Protocol
Description Volunteer patients underwent bronchoscopy from which RNA was extracted using a commercial RNA extraction kit. Targets were produced using standard Affymetrix procedures from about 8ug of total RNA.
Keywords = Homo Sapiens, bronchial epithelia, molecular screen for smoking related changes to transcript levels in bronchial epithelia
Data processing MAS5.0 Scaled 100 generated expression value
 
Submission date Jan 24, 2004
Last update date Aug 18, 2014
Contact name Avrum Spira
E-mail(s) [email protected]
Phone 617-638-4860
Fax 617-536-8093
URL http://www.pulmonomics.com
Organization name Boston University Medical Center
Department Pulmonary and Critical Care Medicine
Lab Pulmonomics Lab
Street address 715 Albany Street, R304
City Boston
State/province MA
ZIP/Postal code 02118
Country USA
 
Platform ID GPL96
Series (1)
GSE994 Effects of cigarette smoke on the human airway epithelial cell transcriptome
Relations
Reanalyzed by GSE60486

Data table header descriptions
ID_REF Affymetrix Probeset ID
VALUE MAS5.0 Scaled 100 generated expression value
DETECTION P-VALUE P-Value that indicates the significance level of the detection call

Data table
ID_REF VALUE DETECTION P-VALUE
1007_s_at 1068.800 0.000959
1053_at 25.700 0.204022
117_at 40.400 0.204022
121_at 397.700 0.021866
1255_g_at 3.500 0.479380
1294_at 165.300 0.035163
1316_at 61.900 0.008689
1320_at 11.100 0.602006
1405_i_at 228.700 0.000491
1431_at 12.800 0.150527
1438_at 25.500 0.621816
1487_at 184.600 0.060419
1494_f_at 131.900 0.021866
1598_g_at 391.000 0.014937
160020_at 244.200 0.011447
1729_at 156.300 0.001354
1773_at 10.500 0.418069
177_at 31.300 0.378184
179_at 450.500 0.054470
1861_at 57.400 0.048995

Total number of rows: 22215

Table truncated, full table size 586 Kbytes.




Supplementary file Size Download File type/resource
GSM15732.CEL.gz 3.2 Mb (ftp)(http) CEL

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