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Sample GSM1571658 Query DataSets for GSM1571658
Status Public on Jul 27, 2016
Title whole blood-nonSBI-53 (6747965057_E)
Sample type RNA
 
Source name whole blood,nonSBI
Organism Homo sapiens
Characteristics age (days): 2
gender: M
race: White
ethnicity: Not Hispanic or Latino
condition: nonSBI
supplemental condition information: SBI-(Viral -)
tissue: whole blood
Treatment protocol None
Growth protocol None
Extracted molecule total RNA
Extraction protocol Blood samples for microarray analyses were placed in baby tempus tubes (Applied Biosystems, CA, USA), frozen and batch shipped to a central laboratory for hybridization
Label biotin
Label protocol Biotinylated cRNA were prepared with the Illumina TotalPrep kit for Illumina arrays.
 
Hybridization protocol Standard Illumina hybridization protocol .
Scan protocol Standard Illumina scanning protocol .
Description Sample name: 6747965057_E
Illumina HT12 V4 R2
Data processing The data were normalized using average normalization in GenomeStudio’s gene expression module.
 
Submission date Dec 23, 2014
Last update date Mar 16, 2023
Contact name Nicole Baldwin
E-mail(s) [email protected]
Organization name Baylor Research Institute
Street address 3434 Live Oak St
City Dallas
ZIP/Postal code 75204
Country USA
 
Platform ID GPL10558
Series (1)
GSE64456 Defining RNA Transcriptional Biosignatures to Distinguish Febrile Infants 60 Days of Age and Younger with Bacterial vs Non-Bacterial Infections
Relations
Reanalyzed by GSE162330

Data table header descriptions
ID_REF
VALUE Average normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2209417 -5.876 0.8182
ILMN_3306019 1.3049 0.4065
ILMN_3294156 -5.1482 0.787
ILMN_1765401 6.3616 0.1584
ILMN_1652171 1.5723 0.3896
ILMN_1652170 -5.3499 0.7987
ILMN_1792710 0.1324 0.4662
ILMN_3294158 11.0685 0.0532
ILMN_1703558 46.9713 0
ILMN_1812666 10.5034 0.061
ILMN_1720799 100.9044 0
ILMN_1703557 7.8404 0.1156
ILMN_1800197 88.2706 0
ILMN_1652175 2.2461 0.339
ILMN_1732309 7.1787 0.139
ILMN_3245495 -0.782 0.526
ILMN_1872037 11.3666 0.0481
ILMN_1765409 18.8888 0.0039
ILMN_1693519 0.9124 0.4299
ILMN_1829064 10.6042 0.0597

Total number of rows: 47323

Table truncated, full table size 1240 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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