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Sample GSM1571519 Query DataSets for GSM1571519
Status Public on Jul 27, 2016
Title whole blood-nonSBI-102 (5543531004_E)
Sample type RNA
 
Source name whole blood,nonSBI
Organism Homo sapiens
Characteristics age (days): 50
gender: F
race: Black or African American
ethnicity: Not Hispanic or Latino
condition: nonSBI
supplemental condition information: SBI- VTN_NSBI
tissue: whole blood
Treatment protocol None
Growth protocol None
Extracted molecule total RNA
Extraction protocol Blood samples for microarray analyses were placed in baby tempus tubes (Applied Biosystems, CA, USA), frozen and batch shipped to a central laboratory for hybridization
Label biotin
Label protocol Biotinylated cRNA were prepared with the Illumina TotalPrep kit for Illumina arrays.
 
Hybridization protocol Standard Illumina hybridization protocol .
Scan protocol Standard Illumina scanning protocol .
Description Sample name: 5543531004_E
Illumina HT12 V4 R1
Data processing The data were normalized using average normalization in GenomeStudio’s gene expression module.
 
Submission date Dec 23, 2014
Last update date Mar 16, 2023
Contact name Nicole Baldwin
E-mail(s) [email protected]
Organization name Baylor Research Institute
Street address 3434 Live Oak St
City Dallas
ZIP/Postal code 75204
Country USA
 
Platform ID GPL10558
Series (1)
GSE64456 Defining RNA Transcriptional Biosignatures to Distinguish Febrile Infants 60 Days of Age and Younger with Bacterial vs Non-Bacterial Infections

Data table header descriptions
ID_REF
VALUE Average normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1343291 20578.9082 0
ILMN_1343295 2156.0239 0
ILMN_1651199 10.259 0.3221
ILMN_1651209 13.3653 0.2662
ILMN_1651210 16.9335 0.1974
ILMN_1651221 24.5207 0.0883
ILMN_1651228 1303.098 0
ILMN_1651229 80.0826 0
ILMN_1651230 8.2797 0.3481
ILMN_1651232 21.8977 0.1182
ILMN_1651235 -14.0087 0.7286
ILMN_1651236 -16.8922 0.7597
ILMN_1651237 -17.1581 0.7636
ILMN_1651238 -27.1789 0.9299
ILMN_1651249 0.6906 0.5299
ILMN_1651253 4.8411 0.4234
ILMN_1651254 828.8643 0
ILMN_1651259 67.6402 0
ILMN_1651260 -30.8308 0.9805
ILMN_1651262 636.9124 0

Total number of rows: 47231

Table truncated, full table size 1242 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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