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Sample GSM1571486 Query DataSets for GSM1571486
Status Public on Jul 27, 2016
Title whole blood-nonSBI-69 (5543531006_A)
Sample type RNA
 
Source name whole blood,nonSBI
Organism Homo sapiens
Characteristics age (days): 15
gender: M
race: Black or African American
ethnicity: Unknown
condition: nonSBI
supplemental condition information: SBI- flu+ H1N1-_NSBI
tissue: whole blood
Treatment protocol None
Growth protocol None
Extracted molecule total RNA
Extraction protocol Blood samples for microarray analyses were placed in baby tempus tubes (Applied Biosystems, CA, USA), frozen and batch shipped to a central laboratory for hybridization
Label biotin
Label protocol Biotinylated cRNA were prepared with the Illumina TotalPrep kit for Illumina arrays.
 
Hybridization protocol Standard Illumina hybridization protocol .
Scan protocol Standard Illumina scanning protocol .
Description Sample name: 5543531006_A
Illumina HT12 V4 R1
Data processing The data were normalized using average normalization in GenomeStudio’s gene expression module.
 
Submission date Dec 23, 2014
Last update date Mar 16, 2023
Contact name Nicole Baldwin
E-mail(s) [email protected]
Organization name Baylor Research Institute
Street address 3434 Live Oak St
City Dallas
ZIP/Postal code 75204
Country USA
 
Platform ID GPL10558
Series (1)
GSE64456 Defining RNA Transcriptional Biosignatures to Distinguish Febrile Infants 60 Days of Age and Younger with Bacterial vs Non-Bacterial Infections

Data table header descriptions
ID_REF
VALUE Average normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1343291 15799.7207 0
ILMN_1343295 1753.2704 0
ILMN_1651199 -1.0449 0.5571
ILMN_1651209 8.6747 0.313
ILMN_1651210 19.5612 0.0818
ILMN_1651221 14.6063 0.174
ILMN_1651228 739.2499 0
ILMN_1651229 64.3174 0
ILMN_1651230 5.2936 0.3909
ILMN_1651232 20.7864 0.0701
ILMN_1651235 -3.5554 0.6117
ILMN_1651236 -19.0706 0.8519
ILMN_1651237 4.9859 0.4052
ILMN_1651238 -27.667 0.9909
ILMN_1651249 -5.3044 0.6455
ILMN_1651253 -2.5274 0.5844
ILMN_1651254 921.6175 0
ILMN_1651259 82.8647 0
ILMN_1651260 -22.4775 0.9325
ILMN_1651262 1036.9547 0

Total number of rows: 47231

Table truncated, full table size 1228 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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