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Sample GSM1571440 Query DataSets for GSM1571440
Status Public on Jul 27, 2016
Title whole blood-nonSBI-23 (5543434058_C)
Sample type RNA
 
Source name whole blood,nonSBI
Organism Homo sapiens
Characteristics age (days): 46
gender: M
race: White
ethnicity: Not Hispanic or Latino
condition: nonSBI
supplemental condition information: SBI- ENTEROVIRUS_NSBI
tissue: whole blood
Treatment protocol None
Growth protocol None
Extracted molecule total RNA
Extraction protocol Blood samples for microarray analyses were placed in baby tempus tubes (Applied Biosystems, CA, USA), frozen and batch shipped to a central laboratory for hybridization
Label biotin
Label protocol Biotinylated cRNA were prepared with the Illumina TotalPrep kit for Illumina arrays.
 
Hybridization protocol Standard Illumina hybridization protocol .
Scan protocol Standard Illumina scanning protocol .
Description Sample name: 5543434058_C
Illumina HT12 V4 R1
Data processing The data were normalized using average normalization in GenomeStudio’s gene expression module.
 
Submission date Dec 23, 2014
Last update date Mar 16, 2023
Contact name Nicole Baldwin
E-mail(s) [email protected]
Organization name Baylor Research Institute
Street address 3434 Live Oak St
City Dallas
ZIP/Postal code 75204
Country USA
 
Platform ID GPL10558
Series (1)
GSE64456 Defining RNA Transcriptional Biosignatures to Distinguish Febrile Infants 60 Days of Age and Younger with Bacterial vs Non-Bacterial Infections
Relations
Reanalyzed by GSE162330

Data table header descriptions
ID_REF
VALUE Average normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1343291 15701.1465 0
ILMN_1343295 1134.0009 0
ILMN_1651199 5.8974 0.2169
ILMN_1651209 7.4827 0.1519
ILMN_1651210 -0.1075 0.5104
ILMN_1651221 14.193 0.039
ILMN_1651228 3110.3633 0
ILMN_1651229 38.546 0
ILMN_1651230 1.7564 0.4026
ILMN_1651232 9.1503 0.113
ILMN_1651235 1.083 0.4377
ILMN_1651236 2.9158 0.3455
ILMN_1651237 5.828 0.2208
ILMN_1651238 -9.7744 0.8896
ILMN_1651249 -3.0397 0.6403
ILMN_1651253 -2.2595 0.6091
ILMN_1651254 774.5842 0
ILMN_1651259 33.0909 0
ILMN_1651260 -6.1233 0.7727
ILMN_1651262 574.5264 0

Total number of rows: 47231

Table truncated, full table size 1220 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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