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Sample GSM1539716 Query DataSets for GSM1539716
Status Public on Aug 05, 2015
Title 7348931015_D
Sample type RNA
 
Source name Blood
Organism Homo sapiens
Characteristics status: CTL
ethnicity: British_English
age: 78
gender: Female
included in case -control study: no
tissue: blood
Extracted molecule total RNA
Extraction protocol RNA was extracted using PAXgene™ Blood RNA Kit (Qiagen), according to the manufacturer’s instructions
Label biotin
Label protocol TotalPrep™ RNA Amplification Kit (Ambion) using manufacturere's protocol
 
Hybridization protocol cDNA was synthesized from 200ng total RNA using TotalPrep™ RNA Amplification Kit (Ambion) which was followed by amplification and biotinylation of cRNA and hybridization.
Scan protocol Illumina Beadarray Scanner
Description DCR00345
Data processing Using LUMI package in R
 
Submission date Nov 06, 2014
Last update date May 30, 2024
Contact name James Timmons
E-mail(s) [email protected], [email protected]
Organization name Augur Precision Medicine LTD
Street address Bridge of Allan
City Stirling
ZIP/Postal code FK9 4AX
Country United Kingdom
 
Platform ID GPL10558
Series (2)
GSE63061 Alzheimer, Mild Cognitive impairment and control samples from AddneuroMed Cohort (batch 2)
GSE63063 Alzheimer, Mild Cognitive impairment and control samples from AddneuroMed Cohort

Data table header descriptions
ID_REF
VALUE The raw intensities were variance-stabilization transformed and then quantile normalized

Data table
ID_REF VALUE
ILMN_2055271 6.020892409
ILMN_1806310 6.036777579
ILMN_1653355 6.033223303
ILMN_1705025 6.019025533
ILMN_1814316 6.028169249
ILMN_3241953 6.404502672
ILMN_1735045 6.000834441
ILMN_1680754 6.068649866
ILMN_1659452 6.033612676
ILMN_1767388 6.031828252
ILMN_1755321 6.094470509
ILMN_1698554 6.226105149
ILMN_1814092 6.151469954
ILMN_2061446 6.843502932
ILMN_1676336 6.354661858
ILMN_1752884 6.025372811
ILMN_1668851 6.007281362
ILMN_1726986 6.041153071
ILMN_3237396 6.836764619
ILMN_1688755 7.214669793

Total number of rows: 32049

Table truncated, full table size 779 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
Processed data are available on Series record

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