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Sample GSM1539692 Query DataSets for GSM1539692
Status Public on Aug 05, 2015
Title 7196843036_B
Sample type RNA
 
Source name Blood
Organism Homo sapiens
Characteristics status: AD
ethnicity: Western European
age: 83
gender: Female
included in case -control study: no
tissue: blood
Extracted molecule total RNA
Extraction protocol RNA was extracted using PAXgene™ Blood RNA Kit (Qiagen), according to the manufacturer’s instructions
Label biotin
Label protocol TotalPrep™ RNA Amplification Kit (Ambion) using manufacturere's protocol
 
Hybridization protocol cDNA was synthesized from 200ng total RNA using TotalPrep™ RNA Amplification Kit (Ambion) which was followed by amplification and biotinylation of cRNA and hybridization.
Scan protocol Illumina Beadarray Scanner
Description LDZADC019
Data processing Using LUMI package in R
 
Submission date Nov 06, 2014
Last update date May 30, 2024
Contact name James Timmons
E-mail(s) [email protected], [email protected]
Organization name Augur Precision Medicine LTD
Street address Bridge of Allan
City Stirling
ZIP/Postal code FK9 4AX
Country United Kingdom
 
Platform ID GPL10558
Series (2)
GSE63061 Alzheimer, Mild Cognitive impairment and control samples from AddneuroMed Cohort (batch 2)
GSE63063 Alzheimer, Mild Cognitive impairment and control samples from AddneuroMed Cohort

Data table header descriptions
ID_REF
VALUE The raw intensities were variance-stabilization transformed and then quantile normalized

Data table
ID_REF VALUE
ILMN_2055271 6.155712215
ILMN_1806310 6.030676033
ILMN_1653355 6.147829318
ILMN_1705025 6.020360768
ILMN_1814316 6.021238897
ILMN_3241953 6.117118399
ILMN_1735045 6.010496161
ILMN_1680754 6.051414231
ILMN_1659452 6.12790607
ILMN_1767388 6.064065255
ILMN_1755321 6.21295945
ILMN_1698554 6.142686681
ILMN_1814092 6.149655542
ILMN_2061446 6.890675806
ILMN_1676336 6.32427949
ILMN_1752884 6.042498439
ILMN_1668851 6.0230027
ILMN_1726986 6.163609839
ILMN_3237396 6.6613288
ILMN_1688755 7.492923767

Total number of rows: 32049

Table truncated, full table size 778 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
Processed data are available on Series record

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