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Sample GSM1539605 Query DataSets for GSM1539605
Status Public on Aug 05, 2015
Title 7196843072_G
Sample type RNA
 
Source name Blood
Organism Homo sapiens
Characteristics status: CTL
ethnicity: Western European
age: 82
gender: Female
included in case -control study: no
tissue: blood
Extracted molecule total RNA
Extraction protocol RNA was extracted using PAXgene™ Blood RNA Kit (Qiagen), according to the manufacturer’s instructions
Label biotin
Label protocol TotalPrep™ RNA Amplification Kit (Ambion) using manufacturere's protocol
 
Hybridization protocol cDNA was synthesized from 200ng total RNA using TotalPrep™ RNA Amplification Kit (Ambion) which was followed by amplification and biotinylation of cRNA and hybridization.
Scan protocol Illumina Beadarray Scanner
Description LNDCTL073
Data processing Using LUMI package in R
 
Submission date Nov 06, 2014
Last update date May 30, 2024
Contact name James Timmons
E-mail(s) [email protected], [email protected]
Organization name Augur Precision Medicine LTD
Street address Bridge of Allan
City Stirling
ZIP/Postal code FK9 4AX
Country United Kingdom
 
Platform ID GPL10558
Series (2)
GSE63061 Alzheimer, Mild Cognitive impairment and control samples from AddneuroMed Cohort (batch 2)
GSE63063 Alzheimer, Mild Cognitive impairment and control samples from AddneuroMed Cohort

Data table header descriptions
ID_REF
VALUE The raw intensities were variance-stabilization transformed and then quantile normalized

Data table
ID_REF VALUE
ILMN_2055271 6.146660326
ILMN_1806310 6.057009208
ILMN_1653355 6.020339275
ILMN_1705025 6.066876768
ILMN_1814316 6.062450226
ILMN_3241953 6.21491646
ILMN_1735045 6.010516674
ILMN_1680754 6.032263696
ILMN_1659452 6.091788825
ILMN_1767388 5.99573816
ILMN_1755321 6.159254419
ILMN_1698554 6.155489851
ILMN_1814092 6.228366246
ILMN_2061446 7.214636565
ILMN_1676336 6.148484358
ILMN_1752884 6.013858722
ILMN_1668851 5.996874691
ILMN_1726986 6.110952863
ILMN_3237396 6.880520745
ILMN_1688755 8.051404307

Total number of rows: 32049

Table truncated, full table size 779 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
Processed data are available on Series record

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