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Sample GSM1539571 Query DataSets for GSM1539571
Status Public on Aug 05, 2015
Title 7196843090_F
Sample type RNA
 
Source name Blood
Organism Homo sapiens
Characteristics status: AD
ethnicity: Western European
age: 85
gender: Female
included in case -control study: no
tissue: blood
Extracted molecule total RNA
Extraction protocol RNA was extracted using PAXgene™ Blood RNA Kit (Qiagen), according to the manufacturer’s instructions
Label biotin
Label protocol TotalPrep™ RNA Amplification Kit (Ambion) using manufacturere's protocol
 
Hybridization protocol cDNA was synthesized from 200ng total RNA using TotalPrep™ RNA Amplification Kit (Ambion) which was followed by amplification and biotinylation of cRNA and hybridization.
Scan protocol Illumina Beadarray Scanner
Description LNDADC024
Data processing Using LUMI package in R
 
Submission date Nov 06, 2014
Last update date May 30, 2024
Contact name James Timmons
E-mail(s) [email protected], [email protected]
Organization name Augur Precision Medicine LTD
Street address Bridge of Allan
City Stirling
ZIP/Postal code FK9 4AX
Country United Kingdom
 
Platform ID GPL10558
Series (2)
GSE63061 Alzheimer, Mild Cognitive impairment and control samples from AddneuroMed Cohort (batch 2)
GSE63063 Alzheimer, Mild Cognitive impairment and control samples from AddneuroMed Cohort

Data table header descriptions
ID_REF
VALUE The raw intensities were variance-stabilization transformed and then quantile normalized

Data table
ID_REF VALUE
ILMN_2055271 6.126734736
ILMN_1806310 5.993084114
ILMN_1653355 6.097625539
ILMN_1705025 6.003292489
ILMN_1814316 6.162486089
ILMN_3241953 6.378285042
ILMN_1735045 6.049833039
ILMN_1680754 6.214576682
ILMN_1659452 6.108923655
ILMN_1767388 6.016970194
ILMN_1755321 6.070447756
ILMN_1698554 6.093476666
ILMN_1814092 6.081245721
ILMN_2061446 6.816875186
ILMN_1676336 6.26495644
ILMN_1752884 6.043383144
ILMN_1668851 6.026168534
ILMN_1726986 6.059074265
ILMN_3237396 6.380821896
ILMN_1688755 7.254449796

Total number of rows: 32049

Table truncated, full table size 779 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
Processed data are available on Series record

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