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Sample GSM1539500 Query DataSets for GSM1539500
Status Public on Aug 05, 2015
Title 7196843032_G
Sample type RNA
 
Source name Blood
Organism Homo sapiens
Characteristics status: CTL
ethnicity: Western European
age: 73
gender: Male
included in case -control study: yes
tissue: blood
Extracted molecule total RNA
Extraction protocol RNA was extracted using PAXgene™ Blood RNA Kit (Qiagen), according to the manufacturer’s instructions
Label biotin
Label protocol TotalPrep™ RNA Amplification Kit (Ambion) using manufacturere's protocol
 
Hybridization protocol cDNA was synthesized from 200ng total RNA using TotalPrep™ RNA Amplification Kit (Ambion) which was followed by amplification and biotinylation of cRNA and hybridization.
Scan protocol Illumina Beadarray Scanner
Description LNDCTL079
Data processing Using LUMI package in R
 
Submission date Nov 06, 2014
Last update date May 30, 2024
Contact name James Timmons
E-mail(s) [email protected], [email protected]
Organization name Augur Precision Medicine LTD
Street address Bridge of Allan
City Stirling
ZIP/Postal code FK9 4AX
Country United Kingdom
 
Platform ID GPL10558
Series (2)
GSE63061 Alzheimer, Mild Cognitive impairment and control samples from AddneuroMed Cohort (batch 2)
GSE63063 Alzheimer, Mild Cognitive impairment and control samples from AddneuroMed Cohort

Data table header descriptions
ID_REF
VALUE The raw intensities were variance-stabilization transformed and then quantile normalized

Data table
ID_REF VALUE
ILMN_2055271 6.063182261
ILMN_1806310 6.037774102
ILMN_1653355 6.011257466
ILMN_1705025 6.031804784
ILMN_1814316 6.039163889
ILMN_3241953 6.310346802
ILMN_1735045 6.005983278
ILMN_1680754 6.050233137
ILMN_1659452 6.052701772
ILMN_1767388 6.018984602
ILMN_1755321 6.134283071
ILMN_1698554 6.167658611
ILMN_1814092 6.147525969
ILMN_2061446 6.803517624
ILMN_1676336 6.438388764
ILMN_1752884 6.029914664
ILMN_1668851 6.007650899
ILMN_1726986 6.057054281
ILMN_3237396 6.757795228
ILMN_1688755 7.786523511

Total number of rows: 32049

Table truncated, full table size 778 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
Processed data are available on Series record

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