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Sample GSM1539497 Query DataSets for GSM1539497
Status Public on Aug 05, 2015
Title 7196843081_F
Sample type RNA
 
Source name Blood
Organism Homo sapiens
Characteristics status: CTL
ethnicity: British_English
age: 72
gender: Male
included in case -control study: yes
tissue: blood
Extracted molecule total RNA
Extraction protocol RNA was extracted using PAXgene™ Blood RNA Kit (Qiagen), according to the manufacturer’s instructions
Label biotin
Label protocol TotalPrep™ RNA Amplification Kit (Ambion) using manufacturere's protocol
 
Hybridization protocol cDNA was synthesized from 200ng total RNA using TotalPrep™ RNA Amplification Kit (Ambion) which was followed by amplification and biotinylation of cRNA and hybridization.
Scan protocol Illumina Beadarray Scanner
Description DCR00162
Data processing Using LUMI package in R
 
Submission date Nov 06, 2014
Last update date May 30, 2024
Contact name James Timmons
E-mail(s) [email protected], [email protected]
Organization name Augur Precision Medicine LTD
Street address Bridge of Allan
City Stirling
ZIP/Postal code FK9 4AX
Country United Kingdom
 
Platform ID GPL10558
Series (2)
GSE63061 Alzheimer, Mild Cognitive impairment and control samples from AddneuroMed Cohort (batch 2)
GSE63063 Alzheimer, Mild Cognitive impairment and control samples from AddneuroMed Cohort

Data table header descriptions
ID_REF
VALUE The raw intensities were variance-stabilization transformed and then quantile normalized

Data table
ID_REF VALUE
ILMN_2055271 6.071684201
ILMN_1806310 6.023416209
ILMN_1653355 6.086298511
ILMN_1705025 6.015758811
ILMN_1814316 6.078801293
ILMN_3241953 6.22854314
ILMN_1735045 6.004618879
ILMN_1680754 6.088822826
ILMN_1659452 6.120884855
ILMN_1767388 6.089816153
ILMN_1755321 6.185958164
ILMN_1698554 6.175816947
ILMN_1814092 6.229625675
ILMN_2061446 7.009687753
ILMN_1676336 6.174163967
ILMN_1752884 6.025686215
ILMN_1668851 6.016643936
ILMN_1726986 6.036667698
ILMN_3237396 6.790573679
ILMN_1688755 7.905027484

Total number of rows: 32049

Table truncated, full table size 779 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
Processed data are available on Series record

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