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Sample GSM1539493 Query DataSets for GSM1539493
Status Public on Aug 05, 2015
Title 7196843090_E
Sample type RNA
 
Source name Blood
Organism Homo sapiens
Characteristics status: CTL
ethnicity: British_English
age: 70
gender: Male
included in case -control study: yes
tissue: blood
Extracted molecule total RNA
Extraction protocol RNA was extracted using PAXgene™ Blood RNA Kit (Qiagen), according to the manufacturer’s instructions
Label biotin
Label protocol TotalPrep™ RNA Amplification Kit (Ambion) using manufacturere's protocol
 
Hybridization protocol cDNA was synthesized from 200ng total RNA using TotalPrep™ RNA Amplification Kit (Ambion) which was followed by amplification and biotinylation of cRNA and hybridization.
Scan protocol Illumina Beadarray Scanner
Description DCR00050
Data processing Using LUMI package in R
 
Submission date Nov 06, 2014
Last update date May 30, 2024
Contact name James Timmons
E-mail(s) [email protected], [email protected]
Organization name Augur Precision Medicine LTD
Street address Bridge of Allan
City Stirling
ZIP/Postal code FK9 4AX
Country United Kingdom
 
Platform ID GPL10558
Series (2)
GSE63061 Alzheimer, Mild Cognitive impairment and control samples from AddneuroMed Cohort (batch 2)
GSE63063 Alzheimer, Mild Cognitive impairment and control samples from AddneuroMed Cohort

Data table header descriptions
ID_REF
VALUE The raw intensities were variance-stabilization transformed and then quantile normalized

Data table
ID_REF VALUE
ILMN_2055271 6.127325069
ILMN_1806310 6.00034632
ILMN_1653355 6.110071585
ILMN_1705025 6.046560848
ILMN_1814316 6.025811242
ILMN_3241953 6.119405546
ILMN_1735045 6.027559315
ILMN_1680754 6.145993769
ILMN_1659452 6.039588487
ILMN_1767388 6.080340316
ILMN_1755321 6.060896682
ILMN_1698554 6.104125329
ILMN_1814092 6.158274072
ILMN_2061446 7.165577043
ILMN_1676336 6.339088964
ILMN_1752884 6.026489026
ILMN_1668851 6.024631748
ILMN_1726986 6.022950124
ILMN_3237396 6.754780046
ILMN_1688755 7.150523728

Total number of rows: 32049

Table truncated, full table size 778 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
Processed data are available on Series record

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