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Sample GSM1539488 Query DataSets for GSM1539488
Status Public on Aug 05, 2015
Title 7196835071_G
Sample type RNA
 
Source name Blood
Organism Homo sapiens
Characteristics status: CTL
ethnicity: British_English
age: 69
gender: Male
included in case -control study: yes
tissue: blood
Extracted molecule total RNA
Extraction protocol RNA was extracted using PAXgene™ Blood RNA Kit (Qiagen), according to the manufacturer’s instructions
Label biotin
Label protocol TotalPrep™ RNA Amplification Kit (Ambion) using manufacturere's protocol
 
Hybridization protocol cDNA was synthesized from 200ng total RNA using TotalPrep™ RNA Amplification Kit (Ambion) which was followed by amplification and biotinylation of cRNA and hybridization.
Scan protocol Illumina Beadarray Scanner
Description DCR00015
Data processing Using LUMI package in R
 
Submission date Nov 06, 2014
Last update date May 30, 2024
Contact name James Timmons
E-mail(s) [email protected], [email protected]
Organization name Augur Precision Medicine LTD
Street address Bridge of Allan
City Stirling
ZIP/Postal code FK9 4AX
Country United Kingdom
 
Platform ID GPL10558
Series (2)
GSE63061 Alzheimer, Mild Cognitive impairment and control samples from AddneuroMed Cohort (batch 2)
GSE63063 Alzheimer, Mild Cognitive impairment and control samples from AddneuroMed Cohort

Data table header descriptions
ID_REF
VALUE The raw intensities were variance-stabilization transformed and then quantile normalized

Data table
ID_REF VALUE
ILMN_2055271 6.169433013
ILMN_1806310 6.086251731
ILMN_1653355 6.075211601
ILMN_1705025 6.074091604
ILMN_1814316 6.02537449
ILMN_3241953 6.39120288
ILMN_1735045 6.065535414
ILMN_1680754 6.233258388
ILMN_1659452 6.057565895
ILMN_1767388 6.021273534
ILMN_1755321 6.055851881
ILMN_1698554 6.244215096
ILMN_1814092 6.129202449
ILMN_2061446 7.280779977
ILMN_1676336 6.158011095
ILMN_1752884 6.039341134
ILMN_1668851 6.046861036
ILMN_1726986 6.099681918
ILMN_3237396 6.730580814
ILMN_1688755 7.590242173

Total number of rows: 32049

Table truncated, full table size 778 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
Processed data are available on Series record

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