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Sample GSM1539486 Query DataSets for GSM1539486
Status Public on Aug 05, 2015
Title 7196843091_F
Sample type RNA
 
Source name Blood
Organism Homo sapiens
Characteristics status: CTL
ethnicity: British_English
age: 68
gender: Male
included in case -control study: yes
tissue: blood
Extracted molecule total RNA
Extraction protocol RNA was extracted using PAXgene™ Blood RNA Kit (Qiagen), according to the manufacturer’s instructions
Label biotin
Label protocol TotalPrep™ RNA Amplification Kit (Ambion) using manufacturere's protocol
 
Hybridization protocol cDNA was synthesized from 200ng total RNA using TotalPrep™ RNA Amplification Kit (Ambion) which was followed by amplification and biotinylation of cRNA and hybridization.
Scan protocol Illumina Beadarray Scanner
Description DCR00238
Data processing Using LUMI package in R
 
Submission date Nov 06, 2014
Last update date May 30, 2024
Contact name James Timmons
E-mail(s) [email protected], [email protected]
Organization name Augur Precision Medicine LTD
Street address Bridge of Allan
City Stirling
ZIP/Postal code FK9 4AX
Country United Kingdom
 
Platform ID GPL10558
Series (2)
GSE63061 Alzheimer, Mild Cognitive impairment and control samples from AddneuroMed Cohort (batch 2)
GSE63063 Alzheimer, Mild Cognitive impairment and control samples from AddneuroMed Cohort

Data table header descriptions
ID_REF
VALUE The raw intensities were variance-stabilization transformed and then quantile normalized

Data table
ID_REF VALUE
ILMN_2055271 6.282753539
ILMN_1806310 6.019587067
ILMN_1653355 6.037524482
ILMN_1705025 6.064640299
ILMN_1814316 6.02575873
ILMN_3241953 6.221418042
ILMN_1735045 6.014286614
ILMN_1680754 6.055381467
ILMN_1659452 6.122690991
ILMN_1767388 6.048508062
ILMN_1755321 6.093754303
ILMN_1698554 6.110577003
ILMN_1814092 6.095796581
ILMN_2061446 6.920784736
ILMN_1676336 6.217048069
ILMN_1752884 6.013873568
ILMN_1668851 6.008681043
ILMN_1726986 6.062727451
ILMN_3237396 6.692155102
ILMN_1688755 7.784524565

Total number of rows: 32049

Table truncated, full table size 778 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
Processed data are available on Series record

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