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Sample GSM1539459 Query DataSets for GSM1539459
Status Public on Aug 05, 2015
Title 7196835071_D
Sample type RNA
 
Source name Blood
Organism Homo sapiens
Characteristics status: CTL
ethnicity: British_English
age: 71
gender: Female
included in case -control study: yes
tissue: blood
Extracted molecule total RNA
Extraction protocol RNA was extracted using PAXgene™ Blood RNA Kit (Qiagen), according to the manufacturer’s instructions
Label biotin
Label protocol TotalPrep™ RNA Amplification Kit (Ambion) using manufacturere's protocol
 
Hybridization protocol cDNA was synthesized from 200ng total RNA using TotalPrep™ RNA Amplification Kit (Ambion) which was followed by amplification and biotinylation of cRNA and hybridization.
Scan protocol Illumina Beadarray Scanner
Description DCR00209
Data processing Using LUMI package in R
 
Submission date Nov 06, 2014
Last update date May 30, 2024
Contact name James Timmons
E-mail(s) [email protected], [email protected]
Organization name Augur Precision Medicine LTD
Street address Bridge of Allan
City Stirling
ZIP/Postal code FK9 4AX
Country United Kingdom
 
Platform ID GPL10558
Series (2)
GSE63061 Alzheimer, Mild Cognitive impairment and control samples from AddneuroMed Cohort (batch 2)
GSE63063 Alzheimer, Mild Cognitive impairment and control samples from AddneuroMed Cohort

Data table header descriptions
ID_REF
VALUE The raw intensities were variance-stabilization transformed and then quantile normalized

Data table
ID_REF VALUE
ILMN_2055271 6.076935623
ILMN_1806310 6.009357964
ILMN_1653355 6.113210836
ILMN_1705025 6.084910471
ILMN_1814316 6.018572277
ILMN_3241953 6.196029993
ILMN_1735045 6.036374196
ILMN_1680754 6.028919305
ILMN_1659452 6.00798584
ILMN_1767388 6.030657078
ILMN_1755321 6.043194242
ILMN_1698554 6.125460276
ILMN_1814092 6.066426681
ILMN_2061446 7.105502968
ILMN_1676336 6.32324571
ILMN_1752884 6.004649673
ILMN_1668851 6.012780779
ILMN_1726986 6.056807054
ILMN_3237396 6.495396009
ILMN_1688755 8.085361606

Total number of rows: 32049

Table truncated, full table size 778 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
Processed data are available on Series record

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