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Sample GSM1539452 Query DataSets for GSM1539452
Status Public on Aug 05, 2015
Title 7196843066_K
Sample type RNA
 
Source name Blood
Organism Homo sapiens
Characteristics status: CTL
ethnicity: British_English
age: 69
gender: Female
included in case -control study: yes
tissue: blood
Extracted molecule total RNA
Extraction protocol RNA was extracted using PAXgene™ Blood RNA Kit (Qiagen), according to the manufacturer’s instructions
Label biotin
Label protocol TotalPrep™ RNA Amplification Kit (Ambion) using manufacturere's protocol
 
Hybridization protocol cDNA was synthesized from 200ng total RNA using TotalPrep™ RNA Amplification Kit (Ambion) which was followed by amplification and biotinylation of cRNA and hybridization.
Scan protocol Illumina Beadarray Scanner
Description DCR00091
Data processing Using LUMI package in R
 
Submission date Nov 06, 2014
Last update date May 30, 2024
Contact name James Timmons
E-mail(s) [email protected], [email protected]
Organization name Augur Precision Medicine LTD
Street address Bridge of Allan
City Stirling
ZIP/Postal code FK9 4AX
Country United Kingdom
 
Platform ID GPL10558
Series (2)
GSE63061 Alzheimer, Mild Cognitive impairment and control samples from AddneuroMed Cohort (batch 2)
GSE63063 Alzheimer, Mild Cognitive impairment and control samples from AddneuroMed Cohort

Data table header descriptions
ID_REF
VALUE The raw intensities were variance-stabilization transformed and then quantile normalized

Data table
ID_REF VALUE
ILMN_2055271 6.092381227
ILMN_1806310 6.024493569
ILMN_1653355 6.031477671
ILMN_1705025 6.171318801
ILMN_1814316 6.173426372
ILMN_3241953 6.134849144
ILMN_1735045 6.029889135
ILMN_1680754 6.239268109
ILMN_1659452 6.173564212
ILMN_1767388 6.065097309
ILMN_1755321 6.051414021
ILMN_1698554 6.142523794
ILMN_1814092 6.110429664
ILMN_2061446 6.931136444
ILMN_1676336 6.528042281
ILMN_1752884 6.050512396
ILMN_1668851 6.012222397
ILMN_1726986 6.042766382
ILMN_3237396 6.589943081
ILMN_1688755 7.594770427

Total number of rows: 32049

Table truncated, full table size 779 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
Processed data are available on Series record

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