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Sample GSM1539451 Query DataSets for GSM1539451
Status Public on Aug 05, 2015
Title 7196843062_B
Sample type RNA
 
Source name Blood
Organism Homo sapiens
Characteristics status: CTL
ethnicity: Western European
age: 69
gender: Female
included in case -control study: yes
tissue: blood
Extracted molecule total RNA
Extraction protocol RNA was extracted using PAXgene™ Blood RNA Kit (Qiagen), according to the manufacturer’s instructions
Label biotin
Label protocol TotalPrep™ RNA Amplification Kit (Ambion) using manufacturere's protocol
 
Hybridization protocol cDNA was synthesized from 200ng total RNA using TotalPrep™ RNA Amplification Kit (Ambion) which was followed by amplification and biotinylation of cRNA and hybridization.
Scan protocol Illumina Beadarray Scanner
Description LDZCTL023
Data processing Using LUMI package in R
 
Submission date Nov 06, 2014
Last update date May 30, 2024
Contact name James Timmons
E-mail(s) [email protected], [email protected]
Organization name Augur Precision Medicine LTD
Street address Bridge of Allan
City Stirling
ZIP/Postal code FK9 4AX
Country United Kingdom
 
Platform ID GPL10558
Series (2)
GSE63061 Alzheimer, Mild Cognitive impairment and control samples from AddneuroMed Cohort (batch 2)
GSE63063 Alzheimer, Mild Cognitive impairment and control samples from AddneuroMed Cohort

Data table header descriptions
ID_REF
VALUE The raw intensities were variance-stabilization transformed and then quantile normalized

Data table
ID_REF VALUE
ILMN_2055271 6.046931273
ILMN_1806310 6.046557745
ILMN_1653355 6.031424525
ILMN_1705025 6.180173534
ILMN_1814316 6.078262042
ILMN_3241953 6.116363905
ILMN_1735045 5.987199058
ILMN_1680754 6.038716436
ILMN_1659452 6.210889542
ILMN_1767388 6.016857256
ILMN_1755321 6.045601591
ILMN_1698554 6.082891015
ILMN_1814092 6.142233509
ILMN_2061446 6.8824486
ILMN_1676336 6.124833335
ILMN_1752884 6.02850171
ILMN_1668851 6.005844931
ILMN_1726986 5.992534859
ILMN_3237396 6.855860269
ILMN_1688755 7.603847584

Total number of rows: 32049

Table truncated, full table size 779 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
Processed data are available on Series record

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