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Sample GSM152139 Query DataSets for GSM152139
Status Public on Dec 01, 2007
Title Col-0 drought 3
Sample type RNA
 
Source name Col-0 d3
Organism Arabidopsis thaliana
Characteristics Ecotype: Columbia 0
age: 3 weeks
Condition: drought 2hr
Extracted molecule total RNA
Extraction protocol TriZOL
Label Biotin
Label protocol MessageAmp™ II-Biotin Enhanced
 
Hybridization protocol GeneChip Expression Analysis Technical Manual
Scan protocol GeneChip Expression Analysis Technical Manual
Description GeneChip Expression Analysis Technical Manual
Data processing GeneChip Expression Analysis Technical Manual
 
Submission date Dec 20, 2006
Last update date Aug 28, 2018
Contact name Rafael Catala
E-mail(s) [email protected]
Phone +112123278093
Organization name The Rockefeller University
Department Plan Molecular Biology
Street address 1230 York ave
City New York
State/province NY
ZIP/Postal code 10021
Country USA
 
Platform ID GPL198
Series (1)
GSE6583 Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
Relations
Reanalyzed by GSE119083

Data table header descriptions
ID_REF
VALUE Expression Value
ABS_CALL The absolute call type for expression probe array file
DETECTION-P-VALUE The detection p-value calculated by the MAS 5 software

Data table
ID_REF VALUE ABS_CALL DETECTION-P-VALUE
AFFX-BioB-5_at 369.913 P 4.42873e-05
AFFX-BioB-M_at 468.807 P 5.16732e-05
AFFX-BioB-3_at 361.063 P 5.16732e-05
AFFX-BioC-5_at 1156.14 P 4.42873e-05
AFFX-BioC-3_at 977.39 P 5.16732e-05
AFFX-BioDn-5_at 2076.48 P 4.42873e-05
AFFX-BioDn-3_at 3104.9 P 4.42873e-05
AFFX-CreX-5_at 10052.5 P 4.42873e-05
AFFX-CreX-3_at 11916.3 P 4.42873e-05
AFFX-DapX-5_at 173.98 P 8.14279e-05
AFFX-DapX-M_at 935.754 P 5.16732e-05
AFFX-DapX-3_at 2427.43 P 4.42873e-05
AFFX-LysX-5_at 117.777 P 5.16732e-05
AFFX-LysX-M_at 223.571 P 5.16732e-05
AFFX-LysX-3_at 494.351 P 6.02111e-05
AFFX-PheX-5_at 178.54 P 6.02111e-05
AFFX-PheX-M_at 207.119 P 5.16732e-05
AFFX-PheX-3_at 575.33 P 6.02111e-05
AFFX-ThrX-5_at 68.4477 P 0.000146581
AFFX-ThrX-M_at 225.996 P 9.4506e-05

Total number of rows: 22810

Table truncated, full table size 679 Kbytes.




Supplementary file Size Download File type/resource
GSM152139.CEL.gz 3.2 Mb (ftp)(http) CEL
GSM152139.CHP.gz 5.7 Mb (ftp)(http) CHP
Processed data provided as supplementary file

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