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Sample GSM1424737 Query DataSets for GSM1424737
Status Public on Jun 01, 2017
Title WAT - before bariatric surgery - rep16
Sample type RNA
 
Source name Abdominal subcutaneous WAT
Organism Homo sapiens
Characteristics tissue: Abdominal subcutaneous white adipose (WAT)
gender: Female
obesity status: before bariatric surgery
Treatment protocol Tissues were obtained by needle aspiration under local anasthesia
Growth protocol Human abdominal subcutaneous white adipose tissue
Extracted molecule total RNA
Extraction protocol Total RNA was extracted using RNeasy Lipid Tissue Mini Kit (Qiagen, Hilden, Germany) according to the instructions provided by the manufacturer
Label Biotin
Label protocol Total RNA was amplified and biotin labeled using the Whole Transcript (WT) Sense Target Labeling Protocol
 
Hybridization protocol Biotinylated RNA was hybridized to Gene 1.1 ST Arrays, and then washed, stained and scanned using standardized protocols (Affymetrix Inc., Santa Clara, CA).
Scan protocol Standardized Affymetrix protocols (Affymetrix Inc., Santa Clara, CA)
Description Gene expression profiling based on human abdominal subcutaneous white adipose tissue obtained by needle aspiration
Data processing Results were processed using the RMA method
 
Submission date Jul 02, 2014
Last update date Jun 01, 2017
Contact name Niklas Mejhert
Organization name Karolinska Institutet
Street address Hälsovägen 7
City Stockholm
ZIP/Postal code 141 86
Country Sweden
 
Platform ID GPL11532
Series (1)
GSE59034 A Memory for Obesity in Adipose Tissue

Data table header descriptions
ID_REF
VALUE RMA signal intensity

Data table
ID_REF VALUE
7892501 3.49
7892502 5.32
7892503 2.91
7892504 6.66
7892505 2.87
7892506 5.6
7892507 4.55
7892508 3.94
7892509 8.71
7892510 4.9
7892511 3.52
7892512 4.52
7892513 2.59
7892514 10.11
7892515 7.58
7892516 2.87
7892517 5.1
7892518 3.51
7892519 2.94
7892520 7.93

Total number of rows: 33297

Table truncated, full table size 420 Kbytes.




Supplementary file Size Download File type/resource
GSM1424737_NM46_D72B_H05.CEL.gz 4.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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