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Status
Public on Feb 01, 2007
Title
BM-MSC_rep3B
Sample type
RNA
Source name
human bone marrow-derived mesenchymal stem cell replicate 3
Organism
Homo sapiens Characteristics
Tissue: bone marrow-derived mesenchymal stem cell (Cambrex Lot#4F0312)
Biomaterial provider
Dr Biagio Saitta, Coriell Institute for Medical Research, 403 Haddon Ave, Camden, NJ 08103, USA, [email protected] http://www.coriell.org/
Extracted molecule
total RNA
Extraction protocol
Total RNA was isolated from cells in culture using the RNAeasy Mini Kit (Qiagen), according to manufacturer's protocol
Label
Biotin
Label protocol
Microarray target was prepared following the Affymetrix protocol. In brief, cDNA was synthesized from total RNA using the SuperScript II double-stranded cDNA synthesis kit (Invitrogen), followed by in vitro transcription, where labeled cRNA was generated (Enzo).
Description
none
Data processing
RMA method implemented in BioConductor
Submission date
Oct 12, 2006
Last update date
Oct 13, 2006
Contact name
Kenro Kusumi
E-mail(s)
[email protected] Phone
480-727-8993
Fax
480-965-6899
URL
http://sols.asu.edu/faculty/kkusumi.php Organization name
Arizona State University
Department
School of Life Sciences
Street address
PO Box 874501
City
Tempe
State/province
AZ
ZIP/Postal code
85287
Country
USA
Platform ID
GPL97 Series (1)
GSE6029 Cord Blood-Derived Mesenchymal Stem Cells with Distinct Growth Kinetics, Differentiation Potentials, Expression Profiles
Data table header descriptions ID_REF VALUE RMA expression estimate
Data table ID_REF VALUE 200000_s_at
8.32074259799576
200001_at
10.4212150879193
200002_at
11.0327189940174
200003_s_at
11.3121807956668
200004_at
10.613072185887
200005_at
9.45368346432789
200006_at
10.8146936546398
200007_at
10.4992423439487
200008_s_at
9.20191353130333
200009_at
10.5864926931269
200010_at
10.8041061258104
200011_s_at
8.84867756332623
200012_x_at
11.5800218232846
200013_at
11.3286549988615
200014_s_at
9.3653101280081
200015_s_at
9.7589080703056
200016_x_at
10.899562467424
200017_at
11.2217026504494
200018_at
11.4616782165567
200019_s_at
10.6054891554931
22645 602 Kbytes .Supplementary file Size Download File type/resource GSM139909.CEL.gz
3.0 Mb
(ftp) (http) CEL
