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Status
Public on Feb 01, 2007
Title
UCB-MSC_UCB2_rep3B
Sample type
RNA
Source name
human umbilical cord blood-derived mesenchymal stem cell population 2, replicate 3
Organism
Homo sapiens Characteristics
Tissue: umbilical cord blood-derived mesenchymal stem/stromal cell
Biomaterial provider
Dr Biagio Saitta, Coriell Institute for Medical Research, 403 Haddon Ave, Camden, NJ 08103, USA, [email protected] http://www.coriell.org/
Extracted molecule
total RNA
Extraction protocol
Total RNA was isolated from cells in culture using the RNAeasy Mini Kit (Qiagen), according to manufacturer's protocol
Label
Biotin
Label protocol
Microarray target was prepared following the Affymetrix protocol. In brief, cDNA was synthesized from total RNA using the SuperScript II double-stranded cDNA synthesis kit (Invitrogen), followed by in vitro transcription, where labeled cRNA was generated (Enzo).
Description
none
Data processing
RMA method implemented in BioConductor
Submission date
Oct 12, 2006
Last update date
Oct 13, 2006
Contact name
Kenro Kusumi
E-mail(s)
[email protected] Phone
480-727-8993
Fax
480-965-6899
URL
http://sols.asu.edu/faculty/kkusumi.php Organization name
Arizona State University
Department
School of Life Sciences
Street address
PO Box 874501
City
Tempe
State/province
AZ
ZIP/Postal code
85287
Country
USA
Platform ID
GPL97 Series (1)
GSE6029 Cord Blood-Derived Mesenchymal Stem Cells with Distinct Growth Kinetics, Differentiation Potentials, Expression Profiles
Data table header descriptions ID_REF VALUE RMA expression estimate
Data table ID_REF VALUE 200000_s_at
8.71301229781817
200001_at
10.8284105581923
200002_at
11.0180218445154
200003_s_at
11.3507865244142
200004_at
10.7793681926344
200005_at
9.79835250928362
200006_at
10.8171568214174
200007_at
10.4685164876302
200008_s_at
9.09233776781848
200009_at
10.6746977009637
200010_at
10.7517740189803
200011_s_at
9.54852670867274
200012_x_at
11.4054512220396
200013_at
11.3149507565283
200014_s_at
9.45887210759021
200015_s_at
10.1143715639836
200016_x_at
10.604197919572
200017_at
11.1952635765623
200018_at
11.5221400130279
200019_s_at
10.864757708083
22645 602 Kbytes .Supplementary file Size Download File type/resource GSM139906.CEL.gz
3.1 Mb
(ftp) (http) CEL
