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Sample GSM139635 Query DataSets for GSM139635
Status Public on Dec 19, 2008
Title HB98
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : pCR
Estrogen Receptor : En
Progesterone Receptor : Pn
Size: T2
Node: N1
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) [email protected]
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 9.05437601382574
117_3p_at 7.52149145530495
1494_3p_f_at 7.40496132452798
1552275_3p_s_at 8.0758756785672
1552281_3p_at 9.24319102816033
1552296_3p_at 5.90264219816188
1552302_3p_at 5.99192593586709
1552311_3p_a_at 7.90927718292105
1552321_3p_a_at 4.5591500369647
1552340_3p_at 6.65119621923464
1552343_3p_s_at 6.63797345265027
1552354_3p_at 7.12748588597522
1552476_3p_s_at 7.52880835231774
1552480_3p_s_at 3.71714316048483
1552504_3p_a_at 6.98079809392549
1552518_3p_s_at 6.09139309166677
1552528_3p_at 8.0286113334284
1552535_3p_at 7.61276382504667
1552566_3p_at 6.3705580141368
1552575_3p_a_at 7.43150896148247

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139635.cel.gz 8.7 Mb (ftp)(http) CEL
Processed data included within Sample table

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