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Sample GSM139633 Query DataSets for GSM139633
Status Public on Dec 19, 2008
Title HB96
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : npCR
Estrogen Receptor : En
Progesterone Receptor : Pn
Size: T2
Node: N1
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) [email protected]
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 9.01035174043711
117_3p_at 7.92398284045796
1494_3p_f_at 9.3783713636057
1552275_3p_s_at 7.68186223032043
1552281_3p_at 9.33391317215342
1552296_3p_at 5.75425919855137
1552302_3p_at 6.27746865888664
1552311_3p_a_at 8.31122234402885
1552321_3p_a_at 4.90267253726649
1552340_3p_at 6.64590222545607
1552343_3p_s_at 7.18234303435391
1552354_3p_at 7.39139950557086
1552476_3p_s_at 7.679383060967
1552480_3p_s_at 3.89245360783262
1552504_3p_a_at 7.57149805093512
1552518_3p_s_at 5.42393503790952
1552528_3p_at 8.01461137656072
1552535_3p_at 7.86108617715809
1552566_3p_at 6.79316821905853
1552575_3p_a_at 7.46362730975232

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139633.cel.gz 9.0 Mb (ftp)(http) CEL
Processed data included within Sample table

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