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Sample GSM139629 Query DataSets for GSM139629
Status Public on Dec 19, 2008
Title HB92
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : pCR
Estrogen Receptor : En
Progesterone Receptor : Pn
Size: T2
Node: N0
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) [email protected]
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 8.39548108325215
117_3p_at 7.58023467734619
1494_3p_f_at 7.71051036811117
1552275_3p_s_at 7.50110203563772
1552281_3p_at 9.29379960509933
1552296_3p_at 5.76115990633981
1552302_3p_at 6.05218759444162
1552311_3p_a_at 8.1731244819397
1552321_3p_a_at 4.85108030988509
1552340_3p_at 6.59232621091607
1552343_3p_s_at 7.05572112120681
1552354_3p_at 7.7979831859686
1552476_3p_s_at 7.77144315370027
1552480_3p_s_at 3.87153809486905
1552504_3p_a_at 7.88840064248888
1552518_3p_s_at 5.69506898664727
1552528_3p_at 8.08743170557909
1552535_3p_at 7.91879185451161
1552566_3p_at 6.42040488355147
1552575_3p_a_at 8.33736496744356

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139629.cel.gz 8.7 Mb (ftp)(http) CEL
Processed data included within Sample table

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