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Sample GSM139627 Query DataSets for GSM139627
Status Public on Dec 19, 2008
Title HB90
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : npCR
Estrogen Receptor : En
Progesterone Receptor : Pn
Size: T3
Node: N1
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) [email protected]
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 9.61919174409445
117_3p_at 7.5848708112242
1494_3p_f_at 7.65544135675682
1552275_3p_s_at 7.62907386206931
1552281_3p_at 9.22318356719318
1552296_3p_at 6.59976944973903
1552302_3p_at 6.16714624976677
1552311_3p_a_at 8.37887444353912
1552321_3p_a_at 4.77531884443594
1552340_3p_at 6.84706847657046
1552343_3p_s_at 6.76364254937936
1552354_3p_at 7.95512659224805
1552476_3p_s_at 7.70343907852318
1552480_3p_s_at 3.56997065913384
1552504_3p_a_at 7.48415850602496
1552518_3p_s_at 6.16060393481788
1552528_3p_at 8.51628581473103
1552535_3p_at 7.86432585016778
1552566_3p_at 6.76896849988466
1552575_3p_a_at 7.74799769850153

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139627.cel.gz 8.8 Mb (ftp)(http) CEL
Processed data included within Sample table

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