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Sample GSM139622 Query DataSets for GSM139622
Status Public on Dec 19, 2008
Title HB85
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : pCR
Estrogen Receptor : En
Progesterone Receptor : Pn
Size: T3
Node: N2
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) [email protected]
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 9.41691150938603
117_3p_at 7.59741968373215
1494_3p_f_at 7.54584396601514
1552275_3p_s_at 7.49806652276264
1552281_3p_at 9.43535567900632
1552296_3p_at 6.68643878931257
1552302_3p_at 6.16780743799295
1552311_3p_a_at 8.526909015568
1552321_3p_a_at 5.08736107196032
1552340_3p_at 6.71513195979385
1552343_3p_s_at 6.92813548876688
1552354_3p_at 7.49839450161375
1552476_3p_s_at 7.4640661842472
1552480_3p_s_at 3.79472006754527
1552504_3p_a_at 7.69903724337917
1552518_3p_s_at 5.93734975430347
1552528_3p_at 8.25471645941525
1552535_3p_at 8.02346444023305
1552566_3p_at 6.48115097346437
1552575_3p_a_at 7.43164407522362

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139622.cel.gz 8.9 Mb (ftp)(http) CEL
Processed data included within Sample table

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