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Sample GSM139614 Query DataSets for GSM139614
Status Public on Dec 19, 2008
Title HB77
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : npCR
Estrogen Receptor : En
Progesterone Receptor : Pn
Size: T2
Node: N1
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) [email protected]
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 9.34217188707045
117_3p_at 7.53468612750031
1494_3p_f_at 7.6272508733188
1552275_3p_s_at 7.75697208685115
1552281_3p_at 9.3584653138588
1552296_3p_at 5.9096872281838
1552302_3p_at 6.11362020852125
1552311_3p_a_at 8.53734874717406
1552321_3p_a_at 4.92944581856666
1552340_3p_at 6.71954554195192
1552343_3p_s_at 6.85581401884089
1552354_3p_at 7.57941791918583
1552476_3p_s_at 7.63701758155462
1552480_3p_s_at 4.12122805857412
1552504_3p_a_at 7.82055158927317
1552518_3p_s_at 5.89040569600778
1552528_3p_at 8.45292308688938
1552535_3p_at 7.90220612905644
1552566_3p_at 6.51902829375626
1552575_3p_a_at 7.38478167492839

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139614.cel.gz 8.9 Mb (ftp)(http) CEL
Processed data included within Sample table

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